Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18c17
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   3.8  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   8.9  
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    23   8.9  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 23/87 (26%), Positives = 37/87 (42%)
 Frame = -2

Query: 560 FDSTACLVVSTMTLGCSVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTPASAV 381
           FD  +   V    +  +  + T  +  + A+   A+P A  A    AA  AA   PA+A 
Sbjct: 176 FDDASSPAVPAAPVATAALAATAFAATNAASVATAAPAAITAPAANAASTAA--APAAAT 233

Query: 380 DRAHSRSEWAPLTFE*IAPTCPTAAST 300
             AH+ +  +P+    +A   P   ST
Sbjct: 234 --AHAATA-SPVATAALAAGAPATVST 257


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 586 YGARAVAEQRVKSLKELSWAKANALLSTAY 675
           +GAR   E+ +++   L WA +   +  AY
Sbjct: 91  FGARDTTEKLLRTSLNLQWADSKTTVYEAY 120


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 23/81 (28%), Positives = 35/81 (43%)
 Frame = -2

Query: 671 AVESSAFALAHESSFKDLTRCSATARAPYTLFT*GDIFDSTACLVVSTMTLGCSVTSGTL 492
           A  S+A   A  +S    +  + TA A  T  +  D   +TA    +T T     TS + 
Sbjct: 65  ATTSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTA---EATTTTEAQTTSSSD 121

Query: 491 RSR*SMAAATLASPTARGADT 429
            S  + AAAT  + +   AD+
Sbjct: 122 NSTTTEAAATTTAASETTADS 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,468
Number of Sequences: 2352
Number of extensions: 12081
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)