Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18c14
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.7  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    23   9.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.3  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 595 SGHSSAECKTSKCSVNQ 545
           SGH + EC T +C+V +
Sbjct: 646 SGHGTCECGTCRCTVTE 662


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +2

Query: 482 TIGDIT--EYLIPKGYSLAVTI 541
           TIG I   EY+IPKG+ L + +
Sbjct: 125 TIGTIQLDEYVIPKGFILLLNV 146


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 169 SSGAVLSASQLPVHGSAAAASALT 240
           SSG++ SASQL     AAA  A T
Sbjct: 172 SSGSLTSASQLKRSAEAAAIIAST 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,993
Number of Sequences: 2352
Number of extensions: 15946
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)