Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18c14
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 28 0.075
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 27 0.23
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 25 0.92
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 24 1.6
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 24 1.6
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 24 1.6
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 23 2.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.8
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 2.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 3.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 3.7
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 28.3 bits (60), Expect = 0.075
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -2
Query: 702 RSECSLSAVAVTRDPSPRTTSYAVIVSWYKPALWE*VDIPVPNARPPSVASTNS 541
++E + V + R+ P + A I++W + WE + +P+A S+ S +S
Sbjct: 1164 QAENAYPEVELDRELRPYLRTAAAILTWNEKRFWERLRYAIPSAGDISIESKSS 1217
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 26.6 bits (56), Expect = 0.23
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 150 NQLISLAFKCTILTSLYYNYFRSTRSDTR 64
+ L S C I+ LYYN F++ R+ R
Sbjct: 347 SSLSSFYIPCIIMVFLYYNIFKALRNRAR 375
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 588 IPVPNARPPSVASTNS 541
+P+P AR PSV S +S
Sbjct: 563 LPLPLARTPSVMSASS 578
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.6 bits (51), Expect = 0.92
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 311 NKLPSRDR--RLLCTSRPNWLSLSTTFFEKHLHHRVPIPLYDILELDEQAM 457
NKLP+ L S P+ + FEK LH R+P +++L D ++
Sbjct: 78 NKLPTTPEYNNHLYGSTPDSRDYFSRPFEKRLHSRLPGRNFNLLRADANSV 128
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 288 ISLTALSCWSARATSLRK 235
IS TAL+CW+ SL K
Sbjct: 234 ISGTALNCWTQTENSLEK 251
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 288 ISLTALSCWSARATSLRK 235
IS TAL+CW+ SL K
Sbjct: 105 ISGTALNCWTQTENSLEK 122
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 288 ISLTALSCWSARATSLRK 235
IS TAL+CW+ SL K
Sbjct: 234 ISGTALNCWTQTENSLEK 251
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 243 DSSLAPTSTRGPLKRSRLGSRNGTSFRHETVD 338
++ L T P K + + + G F ETVD
Sbjct: 46 NNGLYTLKTTSPFKNTEIKFKLGEEFEEETVD 77
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 2.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 315 LFHSWTLAWISLTALSCWSARATSLRKCARSCSATVNRKLAGRQNSATTNSRLF 154
+ HS L +S+T + + K A T ++++ G+QNSA+ NS F
Sbjct: 2 IIHSIFLLMVSITLVIAEESDNVLFDKRA----PTGHQEMQGKQNSASLNSENF 51
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.0 bits (47), Expect = 2.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 315 LFHSWTLAWISLTALSCWSARATSLRKCARSCSATVNRKLAGRQNSATTNSRLF 154
+ HS L +S+T + + K A T ++++ G+QNSA+ NS F
Sbjct: 2 IIHSIFLLMVSITLVIAEESDNVLFDKRA----PTGHQEMQGKQNSASLNSENF 51
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 315 LFHSWTLAWISLTALSCWSARATSLRKCARSCSATVNRKLAGRQNSATTNSRLF 154
+ HS L +S+T + + K A T ++++ G+QNSA+ NS F
Sbjct: 2 IIHSIFLLMVSITLVIAEESDNVLFDKRA----PTGHQEMQGKQNSASLNSENF 51
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 424 KRYRNSMMEMFFEKRSRER 368
++YR + E F ++R RER
Sbjct: 290 RKYRETSKERFRDRRERER 308
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.7
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 516 RAIHWPSLLNWLTLHLEVLHSALECPLTPTKRACTTRLLLRMKWFSVTGP 665
+A HW WL+L + + P +P T L+ FS +GP
Sbjct: 19 QAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGP 68
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.7
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 516 RAIHWPSLLNWLTLHLEVLHSALECPLTPTKRACTTRLLLRMKWFSVTGP 665
+A HW WL+L + + P +P T L+ FS +GP
Sbjct: 19 QAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGP 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,739
Number of Sequences: 438
Number of extensions: 4901
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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