Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18b02
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 100 2e-22
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 42 6e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 1e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 2e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.001
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 38 0.001
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 34 0.016
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.021
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.085
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.15
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.26
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 29 0.34
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.45
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.60
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 0.79
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 2.4
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 2.4
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 26 3.2
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 3.2
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 4.2
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 26 4.2
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 7.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 7.3
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 25 7.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.3
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 9.7
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 9.7
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.7
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 25 9.7
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 9.7
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 100 bits (239), Expect = 2e-22
Identities = 46/114 (40%), Positives = 68/114 (59%)
Frame = +2
Query: 206 AVPTESCEFGSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVS 385
A P ++ + +P+Y+ TH+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTI 68
Query: 386 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDXTAYTYRTFV 547
+ +EG+RGL G PT IGYS+QG K+GFYE+FK Y+ ++ A+ YRT +
Sbjct: 69 LSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSI 122
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 41.9 bits (94), Expect = 6e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 487
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 488 KV 493
K+
Sbjct: 177 KL 178
Score = 31.5 bits (68), Expect = 0.085
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 481
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 1e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 290 THTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 454
T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G +
Sbjct: 176 TSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG-E 234
Query: 455 GLCKFGFYEVFKVAYA 502
++ YE FK A A
Sbjct: 235 STLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 350 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 484
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 40.3 bits (90), Expect = 2e-04
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +2
Query: 296 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 448
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 449 MQGLCKFGFYE-VFKVAYAGMLDD 517
C+ GFYE + + LDD
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 421
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 290 THTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 466
T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 223 TATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISSTIT 282
Query: 467 FGFYE 481
+ YE
Sbjct: 283 WSVYE 287
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Frame = +2
Query: 233 GSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE--------KYKNVVNGFKVSV 388
G K+FA + V LD + RL DA+ ++ +V+ ++ +
Sbjct: 127 GYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Query: 389 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK-VAYAGMLD 514
R +G+RGL +G+ P+ +G + FG Y+ K V G L+
Sbjct: 187 RSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLE 229
Score = 29.5 bits (63), Expect = 0.34
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Frame = +2
Query: 182 TGGMAASAAVPTESCEFGSPKY--FAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE-- 349
T AA+A+ P + K F + TA P++ VK +Q E
Sbjct: 3 TSSAAAAASTPVNANTITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMI 62
Query: 350 -------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 490
+YK + FK + EEGV L +G + Y F F + FK
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFK 116
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 33.9 bits (74), Expect = 0.016
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +2
Query: 302 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGYS 448
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 449 MQGLCKFGFYEVFKVAY 499
F YE KV +
Sbjct: 83 PSWSIYFVVYEKCKVLF 99
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 353 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 490
Y N + F+ + EG+ +G P+ G G+ +F YE FK
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK 274
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.021
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 487
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 488 KVAYA 502
K+ +A
Sbjct: 95 KLTFA 99
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.085
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 299 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 466
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 467 FGFYE 481
F YE
Sbjct: 289 FYVYE 293
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 290 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 469
T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 181 TAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIYL 237
Query: 470 GFYEVFK 490
G YE K
Sbjct: 238 GTYEHVK 244
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.26
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 481
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 482 VF 487
+
Sbjct: 88 TY 89
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +2
Query: 308 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 430
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 29.5 bits (63), Expect = 0.34
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 293 HTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 460
H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 34 HSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 461 CKFGFYEVFK 490
F E FK
Sbjct: 94 IYFSVLEFFK 103
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 302 VVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 451
+ P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 131 MTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 424
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 25.4 bits (53), Expect = 5.6
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +2
Query: 296 TAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 436
T PLD+VK R QV AEK ++ K+ + GV+G +G
Sbjct: 189 TISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGLFTRM 248
Query: 437 IGYSMQGLCKFGFYEVFK 490
G+ +E FK
Sbjct: 249 CYIMPSGMISMSVFESFK 266
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 305 VPLDLVKCRLQVDAEKYK 358
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -3
Query: 459 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 361
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 389 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 481
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 368 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 475
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 186 VAWRRLLRYPRSPVN---LDRLNISLFAELVVFCH 281
+AW+ +YP P+ D ++L+AEL++ H
Sbjct: 302 IAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDH 336
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 396 SSRTDTLKPFTTFLYFSA--STWRRHFTRSRGTTAVWVRPHDRTPPTP 259
SSR+DT +P SA + W+R R +G+ + PH + P P
Sbjct: 35 SSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNSDSDSPHHASNPHP 82
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 308 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 421
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 296 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 439
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 290 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFIGYSMQGLCK 466
T V PLD+VK RLQ ++ ++ + + + L KG AP +G + GL +
Sbjct: 38 TTLTVTPLDVVKTRLQSES------ISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQ 91
Query: 467 FGFYEVFKVAYAGMLDDXT 523
+E + + G++ T
Sbjct: 92 IARHEGVRSLWRGLVPSLT 110
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +2
Query: 152 STVAPVAIEQTGGMAASAA-----VPTESCEF 232
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 321 TRSRGTTAVWVRPHDRTPPTPQRAKYLGDPN 229
TRS GT++ +D P + GDPN
Sbjct: 291 TRSTGTSSSMAHSYDSPPSPSSPSDAYGDPN 321
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 67 LKHNNVLFVARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 225
+K NN GA+LS A P Y D W+ V T+G L
Sbjct: 388 VKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGSL 440
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 465 LQRPCIEYPMKVGAHPLARPRTPSSRTDTL 376
+ RP PM+ H L P+ PS++ L
Sbjct: 1024 IPRPLPNLPMEYNDHTLPSPKEPSNQASNL 1053
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 471 PNLQRPCIEYPMKVGAHPLARPRTPSSRTDTLKPF 367
P P + P VGA P + P S++ T PF
Sbjct: 20 PTKASPDSKSPNSVGAIPSSSPLASSTKASTSTPF 54
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = -3
Query: 408 PRTPSSRTDTLKP----FTTFLYFSASTWRRHFTRSRGTTAVWVRPHDRTPPTPQRAKYL 241
P+TP S + + P F+ F+Y + ++ + ++ RP P TP A L
Sbjct: 264 PQTPISMSPPIPPTPSQFSAFMYQNQQSYLSPQSHYENPLSISSRPSPCCPSTPSSAVTL 323
Query: 240 GDPNSQDSVGTAADAAMPPV 181
+ S PP+
Sbjct: 324 SNGFDSQSNAYNNSGTGPPM 343
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 270 PPTPQRAKYLGDPNSQDSVGTAADAAMPP 184
PP P + + L S +S G ++ ++PP
Sbjct: 224 PPAPPKPRRLAARTSSNSSGVSSPTSVPP 252
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 24.6 bits (51), Expect = 9.7
Identities = 25/104 (24%), Positives = 40/104 (38%)
Frame = -3
Query: 423 HPLARPRTPSSRTDTLKPFTTFLYFSASTWRRHFTRSRGTTAVWVRPHDRTPPTPQRAKY 244
HPLA P P + +FS + + R S T AV +P P + K
Sbjct: 79 HPLANP-PPGCPMHKASNENSTGFFS-NLFGREKQNSEATPAV--QPPATCPMSNSNQKP 134
Query: 243 LGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRNGE 112
G V + + +P C +AT ++W G++ + E
Sbjct: 135 AGVSEVLTGVDSKQQSYVPEGCPVATPKRGWFNWFGNNDDQKQE 178
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 347 EKYKNVVNGFKVSVREEGVRGL 412
++Y+ +NGFKV + EE + L
Sbjct: 1744 QRYQKELNGFKVQLEEEREKNL 1765
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,941,893
Number of Sequences: 5004
Number of extensions: 35139
Number of successful extensions: 150
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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