Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18a21
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   1.1  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   4.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.3  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    24   4.3  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   4.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.6  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -2

Query: 246 PGPLPKRRHDQTACYDAHCDNVQHQTDDPSTSSSLHSLGLPRTPSKLPI 100
           P PLP+R   Q           Q + + P  S+S H++ LPR+ +   +
Sbjct: 181 PTPLPRRSSAQPQQQQQQQQRNQQEQEQPRASTS-HAVMLPRSEASTAV 228


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 160 WIICLMLNIIAMSIITSSLIMTPFWERTRPKLSINY 267
           WI  +++NI+A+  I  ++       R + + SINY
Sbjct: 84  WISGVVMNIVALIGILGNIFSMVILSRPQMRSSINY 119


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 98  HKERPQHFGYLETATSTEP-RKLPESQRLK 12
           H   PQH G   +  S EP   LP+ + +K
Sbjct: 167 HVAEPQHLGATHSCVSPEPVNLLPDDELVK 196


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 98  HKERPQHFGYLETATSTEP-RKLPESQRLK 12
           H   PQH G   +  S EP   LP+ + +K
Sbjct: 167 HVAEPQHLGATHSCVSPEPVNLLPDDELVK 196


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 98  HKERPQHFGYLETATSTEP-RKLPESQRLK 12
           H   PQH G   +  S EP   LP+ + +K
Sbjct: 143 HVPEPQHMGATHSCVSPEPVNLLPDDELVK 172


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 98  HKERPQHFGYLETATSTEP-RKLPESQRLK 12
           H   PQH G   +  S EP   LP+ + +K
Sbjct: 143 HVPEPQHMGATHSCVSPEPVNLLPDDELVK 172


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 246 PGPLPKRRHDQTACYDAHCDNVQHQTDDPSTSSS 145
           P PLP+R   Q           QH+ + P  S+S
Sbjct: 205 PTPLPRRSSAQPQQQQQQQQRNQHEQEQPRASTS 238


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 237 EDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELK 356
           E+ AK   ++   ++ + +GE   K+   Q+G + L+ELK
Sbjct: 128 EELAKLLKEMKQSDALKSVGETISKVRRAQNGGM-LLELK 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,414
Number of Sequences: 2352
Number of extensions: 18007
Number of successful extensions: 271
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)