Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a21
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.57
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.57
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 24 1.7
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 24 1.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 24 1.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 24 1.7
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 7.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 7.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 7.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.0
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 7.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 7.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.3
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.4 bits (53), Expect = 0.57
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 142 SFVGTPANTIEIANSTKKDLNILATWKPP 56
SFV P + +E +NS+ L+ AT PP
Sbjct: 31 SFVMEPPSRVEFSNSSGAWLDCTATGSPP 59
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.4 bits (53), Expect = 0.57
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 142 SFVGTPANTIEIANSTKKDLNILATWKPP 56
SFV P + +E +NS+ L+ AT PP
Sbjct: 31 SFVMEPPSRVEFSNSSGAWLDCTATGSPP 59
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 68 SSQNVEVFLCAIGNFDGVRGSPN 136
+S+N +F A+ F GVRG N
Sbjct: 47 NSENFGIFKRALMGFQGVRGKKN 69
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 68 SSQNVEVFLCAIGNFDGVRGSPN 136
+S+N +F A+ F GVRG N
Sbjct: 48 NSENFGIFKRALMGFQGVRGKKN 70
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 68 SSQNVEVFLCAIGNFDGVRGSPN 136
+S+N +F A+ F GVRG N
Sbjct: 47 NSENFGIFKRALMGFQGVRGKKN 69
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 68 SSQNVEVFLCAIGNFDGVRGSPN 136
+S+N +F A+ F GVRG N
Sbjct: 47 NSENFGIFKRALMGFQGVRGKKN 69
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 221 MIKLLVMMLIAIMFSIRQMIHQPLRLFIRWDSREHHR 111
++ LL M ++AIM + + +PL F + + HR
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHR 42
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 7.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 378 SEYSGSNLSTQREL*NHPGLNLSCLLFLQVSSYFLRVIVDR 256
SE S + + P LSC+LF + F+ V+ R
Sbjct: 187 SEESAICAMLKENMPEFPLYQLSCILFFLIPMVFIAVLYIR 227
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.8 bits (44), Expect = 7.0
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +3
Query: 192 NEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWI 365
N H KQ HD L Q D+ K E+A +I ++ +V+ D +
Sbjct: 296 NTDHTKQLSHDVLLRAKQIGFSDKQIASVVKS--SELAVRIQRQENNIRPMVKQIDTV 351
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 127 PANTIEIANSTKKDLNILATWKPPRQQSHV 38
P I I +IL +W+PP Q + V
Sbjct: 1180 PEAPIAIKALVMSSESILVSWRPPSQPNGV 1209
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 221 MIKLLVMMLIAIMFSIRQMIHQPLRLFIRWDSREHHR 111
++ LL M ++AIM + + +PL F + + HR
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHR 42
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 115 IEIANSTKKDLNILATWKPPR 53
IE + +N +A W+PPR
Sbjct: 558 IESISVDSGSINTVAEWEPPR 578
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 180 EHYRNEHHNKQFDHDAFLGE 239
E++ + + K FD + LGE
Sbjct: 414 EYFEHRYQGKFFDEELILGE 433
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 180 EHYRNEHHNKQFDHDAFLGE 239
E++ + + K FD + LGE
Sbjct: 382 EYFEHRYQGKFFDEELILGE 401
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,641
Number of Sequences: 438
Number of extensions: 5134
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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