Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a16
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 41 7e-04
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 6.9
Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z46343-2|CAA86457.1| 253|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL117195-19|CAB55031.1| 269|Caenorhabditis elegans Hypothetical... 28 6.9
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 221 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKMKDALI 400
LY + S S +V +AL KN+D+E VD+ E+ S EINP ++P + +I
Sbjct: 8 LYSYWRSSCSWRVRIALALKNVDYEYKTVDLLS-EEAKSKLKEINPAAKVPTFVVDGQVI 66
Query: 401 PDSTRILDYL-EFYLDSDLVP 460
+S I++YL E + D L+P
Sbjct: 67 TESLAIIEYLEETHPDVPLLP 87
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 221 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKMKDALI 400
LY ++ S S +V AL K ID+E V++ +Q F NP ++P+LK+ +
Sbjct: 7 LYSSWSSGCSSRVRTALALKKIDYEYQPVNLLN-KQKEQEFHGNNPAEKVPILKINGLTL 65
Query: 401 PDSTRILDYL-EFYLDSDLVP 460
+S I++YL E Y D L+P
Sbjct: 66 TESMAIIEYLDEIYPDPPLLP 86
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 221 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKMKDALI 400
LY + Y+Q+VL+ L +KNI E +V++ ++ +W+L +P G +P L++ ++
Sbjct: 101 LYSMRFCPYAQRVLIYLAKKNIPVE--VVNVNP-DRSPNWYLPKSPIGRVPALEINGKVV 157
Query: 401 PDSTRILDYL-EFYLDSDLVP 460
+S I++YL E + + ++P
Sbjct: 158 WESNVIVEYLDELFPTNTILP 178
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 221 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGE-QYSSWFLEINPRGEIPVLKMKDAL 397
LY + S + +V +AL KNID+E +D+ E + ++ F++ NP ++P L +
Sbjct: 6 LYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVINGLS 65
Query: 398 IPDSTRILDYL-EFYLDSDLVP 460
+ +S I++YL E Y D +P
Sbjct: 66 LTESLAIIEYLDEAYPDPPFLP 87
>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
protein C04G2.6 protein.
Length = 1029
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 357 GFISRNQEEYCSPFVMSTIKGSKSIFF 277
G I RN EYC + ST+KG++ F
Sbjct: 356 GIIKRNWREYCGMLLPSTVKGARRHLF 382
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 VLKMKDAL-IPDSTRILDYLEFYLDSDLVPLINVSK 478
+LK D P STRI DY E +L+PL++V +
Sbjct: 303 ILKYSDFHNFPSSTRIFDYSEKSTTDELIPLLSVEQ 338
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 VLKMKDAL-IPDSTRILDYLEFYLDSDLVPLINVSK 478
+LK D P STRI DY E +L+PL++V +
Sbjct: 303 ILKYSDFHNFPSSTRIFDYSEKSTTDELIPLLSVEQ 338
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 547 YNSSRQSVNQFSKFVYGSYHFCIL--RNIYEWNQIRV*IKFQIVQNPSRVWN*RIFHFQN 374
Y S +S+ + + + + H C+L R I E +R + ++N +W I N
Sbjct: 20 YFSDDESLREHRRQRHMTCHMCLLCNRRIPENETLR-----EHMKNKHNIWKLFICVCCN 74
Query: 373 WYFSTRIYFK 344
W F T IY K
Sbjct: 75 WSFGTEIYLK 84
>Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical
protein T28B8.3b protein.
Length = 398
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 92 YENSF*LSQ*FSLKMHYVQKYLEKLPISKSNMKTNEGKKCSI-FLYCNYYSFYSQKV 259
Y N F +SQ + ++K L + + E KC + F++C+Y F QK+
Sbjct: 244 YSNIFPMSQ--QSRRDDIEKLLFRAVYDREISVRKEAAKCLLLFIHCSYIQFSDQKI 298
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 92 YENSF*LSQ*FSLKMHYVQKYLEKLPISKSNMKTNEGKKCSI-FLYCNYYSFYSQKV 259
Y N F +SQ + ++K L + + E KC + F++C+Y F QK+
Sbjct: 1684 YSNIFPMSQ--QSRRDDIEKLLFRAVYDREISVRKEAAKCLLLFIHCSYIQFSDQKI 1738
>Z46343-2|CAA86457.1| 253|Caenorhabditis elegans Hypothetical
protein T23F11.2 protein.
Length = 253
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/59 (20%), Positives = 23/59 (38%)
Frame = +2
Query: 422 DYLEFYLDSDLVPLINVSKDTKVVTTINKFRELIDALPAGVITVGSFFHPHLCGSPKLP 598
DY + D +N+ +D I ++ + G +F ++CG+ K P
Sbjct: 142 DYPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKRRQLNKGCWFSNYICGTEKQP 200
>AL117195-19|CAB55031.1| 269|Caenorhabditis elegans Hypothetical
protein Y57A10A.26 protein.
Length = 269
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 341 FLEINPRGEIPVLKMKDALIPDSTRILDYL-EFYLDSDLVPL 463
F +++ RG+IP +++ DST I+D L E + SDL L
Sbjct: 55 FKKMSARGQIPFIELNGRQHADSTIIIDNLTEHFHKSDLEDL 96
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 547 YNSSRQSVNQFSKFVYGSYHFCIL--RNIYEWNQIRV*IKFQIVQNPSRVWN*RIFHFQN 374
Y S +S+ + + + + H C+L R I E +R + ++N +W I N
Sbjct: 20 YFSDDESLREHRRQRHMTCHMCLLCNRRIPENETLR-----EHMKNKHNIWKLFICVCCN 74
Query: 373 WYFSTRIYFK 344
W F T IY K
Sbjct: 75 WSFGTEIYLK 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,999,572
Number of Sequences: 27780
Number of extensions: 281459
Number of successful extensions: 674
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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