Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a15
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 64 2e-11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.60
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.2
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 4.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 4.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 5.6
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 25 7.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.4
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 25 7.4
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 9.7
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 9.7
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 9.7
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.7
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 9.7
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 9.7
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 64.1 bits (149), Expect = 2e-11
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = +1
Query: 157 HSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEFGGQVDSEAITKF 336
+S F +SL +R + + D + L +YGE LY NLI+ + G +++ +F
Sbjct: 35 YSTFLQSLTDRDFDVKTSYIKDESAKLFEYGERLYDNLILLSSQSKSLGPVFSPKSLLEF 94
Query: 337 IDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYDVTDEGDHTRIVVSPKN 516
+ + RE+ + + E + V+DHFN+ EG I++
Sbjct: 95 VQSGGNLFVVAGSQLPEGIRELGRQLDMFLAERQSVVVDHFNH---AEGSDDIILLD--G 149
Query: 517 LIKAPTIVGEQN--TQPLLFEGTGLIVDKDNSLVLPILSADSTAYSYNPK 660
+ + P I+ ++ P+L++G G + N PIL + T+Y YN K
Sbjct: 150 ISENPYIISDETRAAGPILYKGIGHYLG-PNPQTQPILRGNPTSYIYNTK 198
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.60
Identities = 28/133 (21%), Positives = 58/133 (43%)
Frame = -1
Query: 599 SLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSIS 420
S ++ S S++ S +I + + T+ + S S+ +S L S T + +S+
Sbjct: 113 SATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATP 172
Query: 419 NPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYF 240
+ + SL ++ A+ SS+N ++ +T SST +N+ S
Sbjct: 173 TSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSL 232
Query: 239 DRTRFASSASLNV 201
+ T A++ S ++
Sbjct: 233 NSTTSATATSSSI 245
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Frame = -1
Query: 596 LSTISPVPSNSRGCVFCSPTIVGALIRF--LGDTTMRVWSPSSVTS*LKWSMTAADSSSI 423
LS+ S V S+S S T+ + + + T+ S SS S S TA+ SSS
Sbjct: 210 LSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS 269
Query: 422 SNPHSEAISLYTSPAAALPAI------RRFPPSSMNLVMASLSTCPPNSSTEGANTM--R 267
S+ S + S +SP + I P S+ + + +S S+ SST +++M
Sbjct: 270 SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS 329
Query: 266 FLYKYSPYFDRTRFASSAS 210
+ SP + +SS+S
Sbjct: 330 SSFSSSPTSSSSTISSSSS 348
Score = 26.2 bits (55), Expect = 4.2
Identities = 26/109 (23%), Positives = 51/109 (46%)
Frame = -1
Query: 599 SLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSIS 420
S S+ S P+++ + S + + L ++M S SS S S ++ SSS S
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSM---SSSSSFSSSPTSSSSTISSSSS 348
Query: 419 NPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 273
+P S + S TS + + + SS + ++L++ +SS +++
Sbjct: 349 SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSS 397
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 371 LPAIRRFPPSSMNLVMASLSTCPPNSST 288
+P++ + PPSS+ A ST PP+ S+
Sbjct: 1498 IPSVAQQPPSSVAPATAPSSTLPPSQSS 1525
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 3.2
Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 7/143 (4%)
Frame = -1
Query: 611 TKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLG-DTTMRVWSPSSVTS*LKWSMTAAD 435
T LL S+I S+S + PT+ + L TT VW T L T
Sbjct: 429 TSLLRRSSIDGSASSSSASL-AVPTVSSSTTGSLHYKTTTTVWVTEVFTRYLGDDSTPVT 487
Query: 434 SSSISNPHSEA--ISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFL 261
SSSI + +EA S+ TS A + SS ++ +S NS + +++
Sbjct: 488 SSSIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSVSTS 547
Query: 260 Y----KYSPYFDRTRFASSASLN 204
Y S Y T SS SL+
Sbjct: 548 YIPNASSSVYASSTEALSSNSLS 570
Score = 26.2 bits (55), Expect = 4.2
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Frame = -1
Query: 599 SLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSI- 423
S + S PS+S+ S +I G+ + L +T+ SP+ V+S + ++ ++ DSSS
Sbjct: 635 SFNVNSVGPSSSQTTPTSSSSITGS--QSLKETS----SPAYVSSTVSYTSSSVDSSSTY 688
Query: 422 -----SNPHSEAIS--LYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRF 264
S+ S++ S Y+ P + + SS + +S+S + G NT+
Sbjct: 689 NSTGSSSSDSQSFSGTTYSDPTTTITSEVSSILSSPTSMQSSVSRPQSSGDASGFNTIFT 748
Query: 263 LYKYSPYFDRTRF--ASSASLNVKP*PRSCNDLKNCECVSLIFKLSIRTKVS 114
S + + + +S++S N P++ + I + SI T VS
Sbjct: 749 SISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVS 800
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.2
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -1
Query: 629 ADRIGKTKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS-*LKW 453
A + T+ +++T + V + + T G+ I G +T+ PS+VTS K
Sbjct: 199 ASTVTSTEATTVTTTTAVTVTATETYTVTATNGGSTITSTGASTVTSTQPSTVTSTQRKN 258
Query: 452 SMTAADSSSISNPHSEAISL--YTSPAAALPAI 360
+ T +++ P A S+ YT+ +P I
Sbjct: 259 TATTTKTTTYVGPSPSASSVVAYTTKCIVVPVI 291
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 4.2
Identities = 24/107 (22%), Positives = 46/107 (42%)
Frame = -1
Query: 593 STISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNP 414
S++ P G + C + ++ S SSV+S SSS S+P
Sbjct: 92 SSLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSS-------TTSSSSSSSP 144
Query: 413 HSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 273
S + + TSP+++ + SS + +S S+ +SS+ +++
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 191
Score = 25.0 bits (52), Expect = 9.7
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = -1
Query: 503 TTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVM 324
+T SPSS +S S +++ SSS S+ S + S +S +++ + SS +
Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SSSSSSSS 202
Query: 323 ASLSTCPPNSSTEGANT 273
+S S+ P SST +++
Sbjct: 203 SSSSSVPITSSTSSSHS 219
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 484 DHTRIVVSPKNLIKAPTIVGEQNTQPLLFEGTGLIVDKDNSLVLPILSADSTA 642
DH ++V PK + K + Q PLL L + DN L +P S A
Sbjct: 872 DHALLIVKPKTINKRELLKVFQRPIPLLL--LQLFLVDDNGLRIPYSSKQQLA 922
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 397 EIASECGFEMDEESAAVIDHFNYDVTDEGDHTRIVVSPKNLIKAPTIVGEQ--NTQPLLF 570
E SE + + + ++ D + + PK I PT ++ + P +
Sbjct: 184 ENVSEIKKNREVDDSVALEMLELRAADMSELQGLTRKPKESIPHPTKRRKRAVGSAPSVS 243
Query: 571 EGTGLIVDKDNSLVLPILSA 630
I+D DNS+++P LSA
Sbjct: 244 TDLNNILDDDNSILVPDLSA 263
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.4
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -1
Query: 539 TIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAI 360
++ + + ++++ S + ++S S + S+ S SE S S ++A+P+
Sbjct: 462 SVASSSVSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST 521
Query: 359 RRFPPSS------MNLVMASLSTCPPNSSTEGANTM 270
PSS M V++S S+ P +SS++ ++++
Sbjct: 522 SSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSI 557
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -1
Query: 437 DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGAN 276
+S+ IS P+SE + Y ++ +++ + ++TC P S E N
Sbjct: 35 NSTKISPPYSENVEGYPKVKIEKSLPYKYDNCKLSICVPIVTTCIPYHSVENLN 88
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -1
Query: 434 SSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYK 255
SSS N + + + + A +I R PPS++ SL PP S+ G +
Sbjct: 25 SSSGVNGTNGGMKQVSPVSTARTSIARRPPSTVGSQTGSLVNAPPKRSS-GIERFDHVTG 83
Query: 254 YSPYFDRTRFASSASLNVKP 195
+ +T ++ NVKP
Sbjct: 84 TAENRPQTPSTKASVANVKP 103
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 54 ENHDNFRDIDHFF 92
EN+DNF+D+D F
Sbjct: 523 ENNDNFKDLDELF 535
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 416 PHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSST 288
P+S + T+PA+A P PS+ N S S+ N T
Sbjct: 388 PNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRT 430
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 136 NLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLE 297
NLN + F +L+E +NLV YGE Y N++ P V E
Sbjct: 3 NLNTELDFFVSFSALKEENISQLKVYWAQSNLVELYYGESFYINIVCSRPIVDE 56
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 350 PPSSMNLVMASLSTCPPNSSTEG 282
PP S+N ASL T P+ S EG
Sbjct: 623 PPISLNHFKASLRTIRPSVSQEG 645
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 446 TAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSS 339
T A SS S HSE I+ TS + PPSS
Sbjct: 106 TKATSSRTSYDHSEGITSTTSASPPSAPAPPLPPSS 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,624,443
Number of Sequences: 5004
Number of extensions: 53010
Number of successful extensions: 188
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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