BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a06
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPa... 213 6e-55
BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome, ma... 213 6e-55
BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome, ma... 213 6e-55
BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein. 213 6e-55
BC064398-1|AAH64398.1| 814|Homo sapiens PSMD1 protein protein. 213 6e-55
BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein. 213 6e-55
BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome (... 213 6e-55
BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein. 213 6e-55
BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for IM... 213 6e-55
BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein. 213 6e-55
BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein. 213 6e-55
AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein. 213 6e-55
D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112 p... 209 6e-54
BC007216-1|AAH07216.1| 333|Homo sapiens C5orf4 protein protein. 30 8.2
BC004506-1|AAH04506.2| 299|Homo sapiens C5orf4 protein protein. 30 8.2
>BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPase
subunit 1 protein.
Length = 953
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein.
Length = 865
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC064398-1|AAH64398.1| 814|Homo sapiens PSMD1 protein protein.
Length = 814
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein.
Length = 844
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 1 protein.
Length = 825
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein.
Length = 824
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for
IMAGE:5087823) protein.
Length = 856
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein.
Length = 848
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein.
Length = 869
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 213 bits (519), Expect = 6e-55
Identities = 103/179 (57%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGAGDLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112
protein.
Length = 953
Score = 209 bits (511), Expect = 6e-54
Identities = 102/179 (56%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Frame = +1
Query: 112 ITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQLAA 291
ITSAAGIISLLDE ++KEFAL +L+ +V++FW L+ED+ F Q AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 292 LVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQK--RKALFVDS 465
LVASKV+YHLGAFE+SL YALGA DLF+VN +EYV+T IAK ID YT++ A +
Sbjct: 62 LVASKVFYHLGAFEESLNYALGARDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEG 121
Query: 466 SAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+ ID RLE IVN+MFQRCL+D +Y+QA+G+ALETRR+D+FE++I++S+D+PGML Y+
Sbjct: 122 EKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
>BC007216-1|AAH07216.1| 333|Homo sapiens C5orf4 protein protein.
Length = 333
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = -1
Query: 645 ESVLKHSWYIIRFHNRFLENIHTARLQC*AKRLSVLSIFKAPLEHAIHDVFKTVIN*FSR 466
E VL + + + H F + IH + A + V+S++ P+EHA+ ++ ++
Sbjct: 182 EEVLFYYSHRLLHHPTFYKKIHKKHHEWTAP-IGVISLYAHPIEHAVSNMLPVIVGPLVM 240
Query: 465 TIHKESLSL 439
H S+++
Sbjct: 241 GSHLSSITM 249
>BC004506-1|AAH04506.2| 299|Homo sapiens C5orf4 protein protein.
Length = 299
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = -1
Query: 645 ESVLKHSWYIIRFHNRFLENIHTARLQC*AKRLSVLSIFKAPLEHAIHDVFKTVIN*FSR 466
E VL + + + H F + IH + A + V+S++ P+EHA+ ++ ++
Sbjct: 148 EEVLFYYSHRLLHHPTFYKKIHKKHHEWTAP-IGVISLYAHPIEHAVSNMLPVIVGPLVM 206
Query: 465 TIHKESLSL 439
H S+++
Sbjct: 207 GSHLSSITM 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,218,113
Number of Sequences: 237096
Number of extensions: 1634180
Number of successful extensions: 3808
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3795
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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