Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a06
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro... 250 2e-66
AF186594-4|AAG16726.2| 531|Drosophila melanogaster 26S proteaso... 250 2e-66
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso... 250 2e-66
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P... 250 2e-66
AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome s... 94 1e-19
AJ238857-1|CAB42967.1| 975|Drosophila melanogaster CAS protein ... 29 4.1
AF132562-1|AAD27861.1| 975|Drosophila melanogaster LD14270p pro... 29 4.1
AE014134-2793|AAF53575.1| 975|Drosophila melanogaster CG13281-P... 29 4.1
AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-P... 29 5.4
AE014134-2068|AAF53099.1| 570|Drosophila melanogaster CG6488-PA... 29 5.4
BT001708-1|AAN71463.1| 656|Drosophila melanogaster RE66405p pro... 29 7.2
AY058614-1|AAL13843.1| 676|Drosophila melanogaster LD30829p pro... 29 7.2
AJ781055-1|CAG70683.1| 309|Drosophila melanogaster Pp1Y2 protei... 29 7.2
AF427494-1|AAL25118.1| 309|Drosophila melanogaster protein phos... 29 7.2
AE013599-2227|AAF58035.2| 746|Drosophila melanogaster CG15707-P... 29 7.2
BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p pro... 28 9.5
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ... 28 9.5
>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p
protein.
Length = 1020
Score = 250 bits (611), Expect = 2e-66
Identities = 118/181 (65%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Frame = +1
Query: 106 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 285
M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP LHED+ F +++L
Sbjct: 1 MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60
Query: 286 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 462
A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY +R +
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 463 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 643 F 645
+
Sbjct: 181 Y 181
>AF186594-4|AAG16726.2| 531|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p110 protein.
Length = 531
Score = 250 bits (611), Expect = 2e-66
Identities = 118/181 (65%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Frame = +1
Query: 106 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 285
M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP LHED+ F +++L
Sbjct: 1 MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60
Query: 286 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 462
A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY +R +
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 463 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 643 F 645
+
Sbjct: 181 Y 181
>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p110 protein.
Length = 1020
Score = 250 bits (611), Expect = 2e-66
Identities = 118/181 (65%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Frame = +1
Query: 106 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 285
M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP LHED+ F +++L
Sbjct: 1 MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60
Query: 286 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 462
A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY +R +
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 463 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 643 F 645
+
Sbjct: 181 Y 181
>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
protein.
Length = 1020
Score = 250 bits (611), Expect = 2e-66
Identities = 118/181 (65%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Frame = +1
Query: 106 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 285
M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP LHED+ F +++L
Sbjct: 1 MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60
Query: 286 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 462
A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY +R +
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 463 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 643 F 645
+
Sbjct: 181 Y 181
>AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome
subunit RPN2 protein.
Length = 946
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = +1
Query: 424 DFYTQKRKALFVDSSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESI 603
+F+ + + + A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++I
Sbjct: 34 EFWPEISEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAI 93
Query: 604 MKSDDIPGMLQYAF 645
MKSDD+ GML YA+
Sbjct: 94 MKSDDVRGMLAYAY 107
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 106 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWP 216
M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP
Sbjct: 1 MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWP 37
>AJ238857-1|CAB42967.1| 975|Drosophila melanogaster CAS protein
protein.
Length = 975
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 216 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 67
WP+LID++V+ S FN +G+++ ++ R F S +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179
>AF132562-1|AAD27861.1| 975|Drosophila melanogaster LD14270p
protein.
Length = 975
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 216 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 67
WP+LID++V+ S FN +G+++ ++ R F S +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179
>AE014134-2793|AAF53575.1| 975|Drosophila melanogaster CG13281-PA
protein.
Length = 975
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 216 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 67
WP+LID++V+ S FN +G+++ ++ R F S +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179
>AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-PA
protein.
Length = 1736
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 502 VNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 642
+N++ QRC E+ Q GL L RR+ I E +++ ML YA
Sbjct: 1510 LNQLVQRCSEEHSTHQEAGLLLGLRRL-IGESKMLERKHWLPMLNYA 1555
>AE014134-2068|AAF53099.1| 570|Drosophila melanogaster CG6488-PA
protein.
Length = 570
Score = 29.1 bits (62), Expect = 5.4
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Frame = +1
Query: 340 LTYALGAGDLFDVNARNEY-VDTTIAKAIDFYTQKRKALFVDSSAELIDHR--------- 489
+T A + +F R+E +DT ++K D Q + F+ SAEL + R
Sbjct: 78 ITTAENSRSIFSEFLRSEQQLDTLVSKLPDLSVQCER--FLQDSAELNEQRRLNSITLQK 135
Query: 490 ----LEDI-VNRMFQRCLEDGQYRQALGLALETRRM 582
LE + + ++ +RC+ +G+Y +AL LA R+
Sbjct: 136 NAQLLEVLELPQLMERCIREGRYEEALELAAYATRL 171
>BT001708-1|AAN71463.1| 656|Drosophila melanogaster RE66405p
protein.
Length = 656
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 369 FRREREKRICRHYDRK 416
FR + E+RICRHYD K
Sbjct: 508 FRPKDEQRICRHYDPK 523
>AY058614-1|AAL13843.1| 676|Drosophila melanogaster LD30829p
protein.
Length = 676
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 369 FRREREKRICRHYDRK 416
FR + E+RICRHYD K
Sbjct: 438 FRPKDEQRICRHYDPK 453
>AJ781055-1|CAG70683.1| 309|Drosophila melanogaster Pp1Y2 protein
protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = -1
Query: 453 ESLSLLSVKVDRFCDRSVDIFVSRVHVEKISSPERVC 343
+ L+L + C+RS ++F+S+ + ++S+P ++C
Sbjct: 24 KQLNLTETDIRLLCNRSREVFMSQPMLLELSAPVKIC 60
>AF427494-1|AAL25118.1| 309|Drosophila melanogaster protein
phosphatase 1 catalyticsubunit protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = -1
Query: 453 ESLSLLSVKVDRFCDRSVDIFVSRVHVEKISSPERVC 343
+ L+L + C+RS ++F+S+ + ++S+P ++C
Sbjct: 24 KQLNLTETDIRLLCNRSREVFMSQPMLLELSAPVKIC 60
>AE013599-2227|AAF58035.2| 746|Drosophila melanogaster CG15707-PA
protein.
Length = 746
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 369 FRREREKRICRHYDRK 416
FR + E+RICRHYD K
Sbjct: 508 FRPKDEQRICRHYDPK 523
>BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p protein.
Length = 1085
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 430 KSRSLLRS*CRHIRFSRSRRKDLQPRARMS 341
+S S RS R FSRSR + + PR+R+S
Sbjct: 1031 RSWSKARSPTRRRSFSRSRSRSISPRSRLS 1060
>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
protein.
Length = 1929
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 430 KSRSLLRS*CRHIRFSRSRRKDLQPRARMS 341
+S S RS R FSRSR + + PR+R+S
Sbjct: 1399 RSWSKARSPTRRRSFSRSRSRSISPRSRLS 1428
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,204,953
Number of Sequences: 53049
Number of extensions: 515465
Number of successful extensions: 1463
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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