Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18a05
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119184-1|AAM51044.1|   67|Drosophila melanogaster SD08670p pro...   143   1e-34
AE014297-3615|AAF56326.1|   67|Drosophila melanogaster CG13628-P...   143   1e-34
BT001831-1|AAN71586.1|  332|Drosophila melanogaster RH47694p pro...    29   3.3  
AY075538-1|AAL68345.1|  332|Drosophila melanogaster RH09039p pro...    29   3.3  
AE013599-136|AAM68341.1|  332|Drosophila melanogaster CG14591-PB...    29   3.3  
AE013599-135|AAF57289.1|  332|Drosophila melanogaster CG14591-PA...    29   3.3  

>AY119184-1|AAM51044.1|   67|Drosophila melanogaster SD08670p
           protein.
          Length = 67

 Score =  143 bits (346), Expect = 1e-34
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +3

Query: 219 MIIPVRCFTCGKVIGNKWEAYLGLLQADYTEGDALDVLGLKRYCCRRMLLGHVDLIEKLL 398
           MIIP+RCFTCGKVIGNKWE+YLGLLQA+YTEGDALD LGLKRYCCRRMLLGHVDLIEKLL
Sbjct: 1   MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60

Query: 399 NYSPLEK 419
           NY+PLEK
Sbjct: 61  NYAPLEK 67


>AE014297-3615|AAF56326.1|   67|Drosophila melanogaster CG13628-PA
           protein.
          Length = 67

 Score =  143 bits (346), Expect = 1e-34
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +3

Query: 219 MIIPVRCFTCGKVIGNKWEAYLGLLQADYTEGDALDVLGLKRYCCRRMLLGHVDLIEKLL 398
           MIIP+RCFTCGKVIGNKWE+YLGLLQA+YTEGDALD LGLKRYCCRRMLLGHVDLIEKLL
Sbjct: 1   MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60

Query: 399 NYSPLEK 419
           NY+PLEK
Sbjct: 61  NYAPLEK 67


>BT001831-1|AAN71586.1|  332|Drosophila melanogaster RH47694p
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -1

Query: 314 TFCVIRL*QA*VSFPFVSYNFPACE--------TSYWNNHFVYFLQPKVVVRHWGYKVSM 159
           T  + R+  + ++ PF+++ FP  E         +YW  H + ++ P  ++R   Y V  
Sbjct: 122 TTALFRIQMSNLNGPFLAFLFPEVEGRTYPFEQATYWIQHALLYIIPIYIIRSGAYTVED 181

Query: 158 L*LFIW 141
           L  F W
Sbjct: 182 LSEFHW 187


>AY075538-1|AAL68345.1|  332|Drosophila melanogaster RH09039p
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -1

Query: 314 TFCVIRL*QA*VSFPFVSYNFPACE--------TSYWNNHFVYFLQPKVVVRHWGYKVSM 159
           T  + R+  + ++ PF+++ FP  E         +YW  H + ++ P  ++R   Y V  
Sbjct: 122 TTALFRIQMSNLNGPFLAFLFPEVEGRTYPFEQATYWIQHALLYIIPIYIIRSGAYTVED 181

Query: 158 L*LFIW 141
           L  F W
Sbjct: 182 LSEFHW 187


>AE013599-136|AAM68341.1|  332|Drosophila melanogaster CG14591-PB,
           isoform B protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -1

Query: 314 TFCVIRL*QA*VSFPFVSYNFPACE--------TSYWNNHFVYFLQPKVVVRHWGYKVSM 159
           T  + R+  + ++ PF+++ FP  E         +YW  H + ++ P  ++R   Y V  
Sbjct: 122 TTALFRIQMSNLNGPFLAFLFPEVEGRTYPFEQATYWIQHALLYIIPIYIIRSGAYTVED 181

Query: 158 L*LFIW 141
           L  F W
Sbjct: 182 LSEFHW 187


>AE013599-135|AAF57289.1|  332|Drosophila melanogaster CG14591-PA,
           isoform A protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -1

Query: 314 TFCVIRL*QA*VSFPFVSYNFPACE--------TSYWNNHFVYFLQPKVVVRHWGYKVSM 159
           T  + R+  + ++ PF+++ FP  E         +YW  H + ++ P  ++R   Y V  
Sbjct: 122 TTALFRIQMSNLNGPFLAFLFPEVEGRTYPFEQATYWIQHALLYIIPIYIIRSGAYTVED 181

Query: 158 L*LFIW 141
           L  F W
Sbjct: 182 LSEFHW 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,378,942
Number of Sequences: 53049
Number of extensions: 417557
Number of successful extensions: 831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)