Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18a04
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 206 5e-53
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 206 5e-53
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 206 5e-53
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 206 5e-53
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 206 5e-53
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 206 5e-53
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 189 6e-48
BC101053-1|AAI01054.1| 792|Homo sapiens zinc finger protein 541... 29 9.9
BC101052-1|AAI01053.1| 792|Homo sapiens zinc finger protein 541... 29 9.9
BC101051-1|AAI01052.1| 792|Homo sapiens zinc finger protein 541... 29 9.9
BC101050-1|AAI01051.1| 792|Homo sapiens zinc finger protein 541... 29 9.9
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 206 bits (503), Expect = 5e-53
Identities = 103/145 (71%), Positives = 110/145 (75%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKGG 616
MKIGRIEDVTP+PSDSTR KGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 189 bits (461), Expect = 6e-48
Identities = 95/144 (65%), Positives = 103/144 (71%)
Frame = +2
Query: 182 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 361
MAP K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1 MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60
Query: 362 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 541
KVKADRDE+SPYAAML QDVA++CK LGI ALHI+LRA AQ
Sbjct: 61 KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA 120
Query: 542 XXXMKIGRIEDVTPVPSDSTRXKG 613
MKIGRIEDVTP+PSDST KG
Sbjct: 121 CSGMKIGRIEDVTPIPSDSTLRKG 144
>BC101053-1|AAI01054.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1
Query: 154 ENVVIFRLSHGPEKKQSC*RGGP----GDPRAPAFSG 252
EN R++ G EK +C RGG G+PRAP FSG
Sbjct: 167 ENGAASRITKG-EKGPACSRGGGYRLLGNPRAPRFSG 202
>BC101052-1|AAI01053.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1
Query: 154 ENVVIFRLSHGPEKKQSC*RGGP----GDPRAPAFSG 252
EN R++ G EK +C RGG G+PRAP FSG
Sbjct: 167 ENGAASRITKG-EKGPACSRGGGYRLLGNPRAPRFSG 202
>BC101051-1|AAI01052.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1
Query: 154 ENVVIFRLSHGPEKKQSC*RGGP----GDPRAPAFSG 252
EN R++ G EK +C RGG G+PRAP FSG
Sbjct: 167 ENGAASRITKG-EKGPACSRGGGYRLLGNPRAPRFSG 202
>BC101050-1|AAI01051.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +1
Query: 154 ENVVIFRLSHGPEKKQSC*RGGP----GDPRAPAFSG 252
EN R++ G EK +C RGG G+PRAP FSG
Sbjct: 167 ENGAASRITKG-EKGPACSRGGGYRLLGNPRAPRFSG 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,697,458
Number of Sequences: 237096
Number of extensions: 2033916
Number of successful extensions: 4485
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4479
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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