Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17p18
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.         53   8e-07
BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide bind...    52   2e-06
AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens ...    52   2e-06
AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.                52   2e-06
AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens ...    40   0.010

>AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.
          Length = 549

 Score = 53.2 bits (122), Expect = 8e-07
 Identities = 28/61 (45%), Positives = 33/61 (54%)
 Frame = +3

Query: 183 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 362
           M K KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKKPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 363 L 365
           L
Sbjct: 61  L 61


>BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide binding
           protein-like 3 (nucleolar) protein.
          Length = 549

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 183 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 362
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 363 L 365
           L
Sbjct: 61  L 61


>AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14610 fis, clone NT2RP1000958, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 549

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 183 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 362
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60

Query: 363 L 365
           L
Sbjct: 61  L 61


>AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.
          Length = 560

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 183 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 362
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 363 L 365
           L
Sbjct: 61  L 61


>AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14608 fis, clone NT2RP1000915, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 537

 Score = 39.5 bits (88), Expect = 0.010
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +3

Query: 234 RYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDIL 365
           RYKI+KKV+EH+RK R                +PN  PFKE +L
Sbjct: 6   RYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,036,388
Number of Sequences: 237096
Number of extensions: 1219638
Number of successful extensions: 6024
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6019
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)