Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17o18
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 27 0.11
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 26 0.34
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.7
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.7
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.7
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.7
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 27.5 bits (58), Expect = 0.11
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -2
Query: 285 LNLRYGFRWSTLENSSGPASICATHNESIVH-NHTIIDHRLSDISLN 148
LN Y + +TL++ +G I ++I H +TIID+R +D+S+N
Sbjct: 394 LNDLYNVK-NTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSIN 439
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 126 PYSPHPNN 149
PY PHP+N
Sbjct: 108 PYRPHPHN 115
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 25.8 bits (54), Expect = 0.34
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 77 KPYCSTKRKFLYISNRPIQPAPKQLSEMSLKR*SIIV*LCTIDSL 211
K YC T + +Y + P PK EM+ K + + +C ++ L
Sbjct: 64 KKYCETYKNSIYDVSMTFGPVPKFEGEMAEKISNELNEMCPLEKL 108
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 47 IKYQVYEHSNKPYCSTKRKFLYISNRPIQPAPKQLSEM 160
I ++ + SN P +T KF+ + N KQ+SE+
Sbjct: 432 IANELEDASNIPVHATLEKFMILCNLMRTMNRKQISEL 469
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 269 VSGGRHSRTPRAQRLSVLRTMSQSCIITQLSIIV*ATFRLIVWVRAVWAGC*YKET 102
V G R TP + L + + SCI + I +R + R W G ET
Sbjct: 306 VYGNRELLTPVSTMLPAVFAKTVSCIDPWIYAINHPRYRQELQKRCKWMGIHEPET 361
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 608 GFGSECNTAVVAVPSDFPLFAVLLK 534
GFG E N VPS +++ L+
Sbjct: 389 GFGYESNVKYQVVPSALQMWSTSLR 413
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 9.7
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 7/29 (24%)
Frame = +1
Query: 550 KSGKSDGTATTAVLH-------SLPNPRP 615
K DG A+TAV+H S P+P P
Sbjct: 487 KDSGYDGAASTAVIHEPVVETNSSPSPNP 515
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 608 GFGSECNTAVVAVPSDFPLFAVLLK 534
GFG E N VPS +++ L+
Sbjct: 389 GFGYESNVKYQVVPSALQMWSTSLR 413
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 126 PYSPHPNN 149
PY PHP+N
Sbjct: 108 PYRPHPHN 115
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 608 GFGSECNTAVVAVPSDFPLFAVLLK 534
GFG E N VPS +++ L+
Sbjct: 15 GFGYESNVKYQVVPSALQMWSTSLR 39
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 269 VSGGRHSRTPRAQRLSVLRTMSQSCIITQLSIIV*ATFRLIVWVRAVWAGC*YKET 102
V G R TP + L + + SCI + I +R + R W G ET
Sbjct: 306 VYGNRELLTPVSTMLPAVFAKTVSCIDPWIYAINHPRYRQELQKRCKWMGIHEPET 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,856
Number of Sequences: 438
Number of extensions: 3533
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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