Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17o14
(222 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces... 110 3e-26
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 0.77
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 25 1.4
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 25 1.8
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 24 2.4
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 24 3.1
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 24 3.1
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 24 3.1
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 23 4.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 23 4.1
SPBC30B4.08 |eri1||double-strand siRNA ribonuclease|Schizosaccha... 23 7.2
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 23 7.2
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 23 7.2
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 23 7.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 23 7.2
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 23 7.2
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 22 9.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 22 9.5
SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomy... 22 9.5
>SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 118
Score = 110 bits (264), Expect = 3e-26
Identities = 51/59 (86%), Positives = 57/59 (96%)
Frame = +1
Query: 1 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 177
KIL+ITTRKTP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIA
Sbjct: 59 KILKITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.8 bits (54), Expect = 0.77
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 70 MRIHKRVIDLHSPSEIVKQITSINIEPGV 156
+R+H+R I L + S+ ++ + NIE G+
Sbjct: 406 LRVHERAIKLRTLSDSIRADVAENIEMGI 434
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 1.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 7 LRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 174
LR KT G G + ++ R+ DLH E +I ++ + G+E+E+TI
Sbjct: 802 LRPLLHKTSLGVGDILLE-VNGKMITRLSDLHE-FETESEIKAVILRDGIEMEITI 855
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 22 RKTPCGEGSKTWDRFQM 72
R +P GSKTW+ FQ+
Sbjct: 427 RMSPLRSGSKTWNIFQL 443
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 91 IDLHSPSEIVKQITSINIEPGVEVEVT 171
ID SPS I ++ S N+E G VT
Sbjct: 545 IDGESPSSISSRLPSSNLEQGSSSSVT 571
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 101 CRSITLLWIRI*KRSQVFEPSPQ 33
C + L W+ KRSQ PSP+
Sbjct: 331 CLNFALAWMFEFKRSQYSNPSPE 353
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 19 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE 147
T++ PC S+ + + + +R++D + + Q+TS+ IE
Sbjct: 150 TKRLPCSCLSEIKNIDDLGLKQRILDSYKKQKPSGQLTSMQIE 192
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 62 RSQVFEPSPQGVLRVVI 12
+S++FEP+P G +VVI
Sbjct: 767 QSRIFEPAPPGGRKVVI 783
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 27 NSLW*RFKDLGSFSDANPQESDRPTL 104
N+ W RFK+ G + D + E + P+L
Sbjct: 35 NNEW-RFKNAGEYFDEDNNEEEYPSL 59
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 48 KDLGSFSDANPQESDRPTLSL*NCET 125
KDL ++ ANP RP + L C++
Sbjct: 570 KDLVKYNPANPIPVPRPRVDLTQCKS 595
>SPBC30B4.08 |eri1||double-strand siRNA
ribonuclease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 61 RFQMRIHKRVIDLHSPSEIVKQITSINIE 147
+F+ H+ + D + S IVK++ S N+E
Sbjct: 258 QFEGSEHRGIDDARNLSRIVKKMCSENVE 286
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 112 QRESVGRSLSCGFASENDPRSLNLHHKEFYGW 17
+R SV + SC + N P S+ + + W
Sbjct: 626 KRNSVLSNKSCASSESNTPASVKQDYDDIQSW 657
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 46 SKTWDRFQMRIHKRVIDLHSPSEI 117
+++WDRF + KR + P++I
Sbjct: 230 NESWDRFLPQFKKRNVARRKPAKI 253
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 22.6 bits (46), Expect = 7.2
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 28 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 180
T C EG+ +R + +R+I H +E + + I + PG E ++ + +
Sbjct: 835 TTC-EGTTIENRVGDALVERIIRAHKNNEKWRGVIMIPLLPGFEGQIDLQE 884
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 88 LSCGFASENDPRS 50
L CG+AS DP+S
Sbjct: 63 LKCGYASSIDPKS 75
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 67 QMRIHKRVIDLHSPSEIVKQITSINIEPG 153
+M+I + +ID S +I I ++PG
Sbjct: 225 KMKISRHIIDASGQSVKADRILEIKVKPG 253
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 61 DPRSLNLHHKEFYGW 17
DP LNL HK ++ W
Sbjct: 654 DPYILNLIHKLYFEW 668
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 22.2 bits (45), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 112 QRESVGRSLSCGFASENDPRSLNLHHKE 29
QR+ S S F S+ND S+ L KE
Sbjct: 1618 QRQQGSSSHSMKFRSKNDLSSIKLSTKE 1645
>SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 206
Score = 22.2 bits (45), Expect = 9.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 189 CLRVGDGHLNLYTG 148
C+R GD HL++ G
Sbjct: 96 CIRRGDNHLHIIVG 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 887,423
Number of Sequences: 5004
Number of extensions: 14511
Number of successful extensions: 43
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 2,362,478
effective HSP length: 53
effective length of database: 2,097,266
effective search space used: 41945320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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