Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17o14
(222 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 24 0.25
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 3.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 3.1
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 19 5.5
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 19 7.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 7.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 7.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 7.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 19 9.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 19 9.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 9.5
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 9.5
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.8 bits (49), Expect = 0.25
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 200 IGGSAYASAMVTSTSTPGS 144
+G +Y +A + +TSTPGS
Sbjct: 220 MGRPSYTTATMATTSTPGS 238
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 20.2 bits (40), Expect = 3.1
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -2
Query: 197 GGSAYASAMVTSTSTPGSMLI 135
GG ++++ V + PGS ++
Sbjct: 904 GGQTWSNSQVQGVAVPGSGIV 924
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 3.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 124 QITSINIEPGVEVEVTI 174
Q TS N+E VE++V +
Sbjct: 188 QTTSQNLEDDVEIKVQV 204
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 19.4 bits (38), Expect = 5.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 57 GSFSDANPQESDRPTLSL 110
GS + A+P S PTL+L
Sbjct: 22 GSTTPASPTLSTPPTLNL 39
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 19.0 bits (37), Expect = 7.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 204 FYWRLCL 184
FYW LC+
Sbjct: 89 FYWDLCM 95
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.0 bits (37), Expect = 7.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 204 FYWRLCL 184
FYW LC+
Sbjct: 89 FYWDLCM 95
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 76 FASENDPRSLNLHHKEFYG 20
FAS +LNLHH+ G
Sbjct: 288 FASALAVVTLNLHHRGVRG 306
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.0 bits (37), Expect = 7.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 204 FYWRLCL 184
FYW LC+
Sbjct: 89 FYWDLCM 95
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 18.6 bits (36), Expect = 9.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +2
Query: 53 PGIVFRCES 79
PG+V++C S
Sbjct: 165 PGVVYKCVS 173
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 18.6 bits (36), Expect = 9.5
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +1
Query: 61 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 159
RF+ +I +I +PS +V ++ + G++
Sbjct: 194 RFERQIGHHLIQTFAPSTLVVMLSWFSFWLGLD 226
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 18.6 bits (36), Expect = 9.5
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 70 MRIHKRVIDLHSPSEIVKQI 129
+ H R D H SE VK +
Sbjct: 316 LNYHHRNADTHEMSEWVKVV 335
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 18.6 bits (36), Expect = 9.5
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -1
Query: 96 VDHSLVDSHLKTI 58
V H+ +++HLK +
Sbjct: 95 VSHTCIENHLKQL 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,593
Number of Sequences: 438
Number of extensions: 996
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3407265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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