Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17o08
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.62 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   5.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 297 LNSFNVTDVLGNFVVGSSFGRDRCHYG 217
           L  F   DVLGN +  S    +R +YG
Sbjct: 334 LTEFEGIDVLGNIIESSILSPNRNYYG 360


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 276 DVLGNFVVGSSFGRDRCHYG 217
           D+LGN +  S    +R +YG
Sbjct: 341 DILGNMIESSILSPNRTYYG 360


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 410 CLNMTR**EDSTRYTVHLPY 351
           CLN     + +T YT H PY
Sbjct: 70  CLNGATCQDHTTHYTCHCPY 89


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 460 PNSIHGILQWRGF 498
           P S+HG L WR F
Sbjct: 296 PLSLHGQLLWREF 308


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 163 RSGTSFDCNKFLRSDDMTPVVTTITP-KRTADYKITEYVS 279
           +SG S+  NK +   D +PV   + P   T+ + +   VS
Sbjct: 53  KSGGSYSSNKNVSRADHSPVFGKVEPVPHTSSFNMGYLVS 92


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 169 GTSFDCNKFLRSDDMTPVVTT 231
           G SF   + LRSDD+    T+
Sbjct: 135 GVSFSKKQILRSDDLAVKTTS 155


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 320 STNGRLDGLIVLTSLTY 270
           +TNG LD LIV  S  Y
Sbjct: 333 TTNGDLDELIVTLSAHY 349


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 320 STNGRLDGLIVLTSLTY 270
           +TNG LD LIV  S  Y
Sbjct: 259 TTNGDLDELIVTLSTHY 275


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 10/30 (33%)
 Frame = -1

Query: 362 HLPYFAAS----------CTSGPDSTNGRL 303
           HLPYFAA+            S PD  NG+L
Sbjct: 285 HLPYFAAAVAAASNLSPKTNSSPDLWNGKL 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,676
Number of Sequences: 336
Number of extensions: 2623
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)