Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17n09
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 54 2e-08
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 53 3e-08
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 53 4e-08
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 40 2e-04
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 39 7e-04
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 38 9e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 38 0.002
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 35 0.008
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 32 0.075
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 32 0.075
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 31 0.099
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 31 0.099
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 31 0.13
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 31 0.17
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 29 0.53
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 28 0.92
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 28 1.2
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 1.2
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 1.6
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 2.1
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 27 2.8
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 2.8
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 27 2.8
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 26 4.9
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 26 4.9
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 25 6.5
SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr 2|||Ma... 25 6.5
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 25 6.5
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 25 6.5
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 25 8.6
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.6
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.6
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 25 8.6
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 8.6
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 25 8.6
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 8.6
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 8.6
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 54.0 bits (124), Expect = 2e-08
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Frame = +3
Query: 153 ELPPGWEEKSTEDGNVYFVNSYTKKTQWTHPH--------------TGCKKVIPK--DLP 284
ELPPGWE++ T +G YFV+ T+ T W P T ++ + + LP
Sbjct: 289 ELPPGWEQRYTPEGRPYFVDHNTRTTTWVDPRRQQYIRSYGGPNNATIQQQPVSQLGPLP 348
Query: 285 FGWSKTVDETSKTIYVNRETGNKTYVDPRLAFAKEEK--KHVHDFRQR 422
GW + T++ +V+ T T+ DPRL + ++ ++ DFR++
Sbjct: 349 SGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKRDFRRK 396
Score = 39.5 bits (88), Expect = 4e-04
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 141 DSEDELPPGWEEKSTEDGNVYFVNSYTKKTQWTHPH 248
D LPPGWE ++ G Y+V+ T+ T W P+
Sbjct: 202 DQYGRLPPGWERRTDNLGRTYYVDHNTRSTTWIRPN 237
Score = 32.7 bits (71), Expect = 0.043
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 279 LPFGWSKTVDETSKTIYVNRETGNKTYVDPRLA 377
LP GW + D +T YV+ T + T++ P L+
Sbjct: 207 LPPGWERRTDNLGRTYYVDHNTRSTTWIRPNLS 239
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 53.2 bits (122), Expect = 3e-08
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +3
Query: 465 DLSGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIKE 605
DL+GK AL+TGS+ GIGY TA LAR G + A RN E K +K+
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQ 85
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 52.8 bits (121), Expect = 4e-08
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Frame = +3
Query: 126 NVLDSDSEDELPPGWEEKSTEDGNVYFVNSYTKKTQWTHPH------TGCKKVI-----P 272
+++ SDS ++LP GWE + T+ G YFV+ T+ T W P G + P
Sbjct: 298 SLMQSDSGNDLPFGWEMRYTDTGRPYFVDHNTRTTTWVDPRNPLVRPNGGSSTVGSLMQP 357
Query: 273 KD------LPFGWSKTVDETSKTIYVNRETGNKTYVDPRL--AFAKEEKKHVHDFRQR 422
+ LP GW + +++ +V+ T T+ DPRL A ++ ++ DFR++
Sbjct: 358 QSLSHLGPLPSGWEMRLTNSARVYFVDHNTKTTTWDDPRLPSALDQDVPQYKCDFRRK 415
Score = 47.2 bits (107), Expect = 2e-06
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 29/106 (27%)
Frame = +3
Query: 141 DSEDELPPGWEEKSTEDGNVYFVNSYTKKTQWTHPHTGCKKV----------------IP 272
D LPPGWE ++ G Y+V+ T+ T WT P + V +P
Sbjct: 233 DQYGRLPPGWERRADSLGRTYYVDHNTRTTTWTRPASSTNPVHNTSSDSQRLNHQNRHLP 292
Query: 273 KD-------------LPFGWSKTVDETSKTIYVNRETGNKTYVDPR 371
D LPFGW +T + +V+ T T+VDPR
Sbjct: 293 DDSNPSLMQSDSGNDLPFGWEMRYTDTGRPYFVDHNTRTTTWVDPR 338
Score = 39.1 bits (87), Expect = 5e-04
Identities = 25/85 (29%), Positives = 35/85 (41%)
Frame = +3
Query: 156 LPPGWEEKSTEDGNVYFVNSYTKKTQWTHPHTGCKKVIPKDLPFGWSKTVDETSKTIYVN 335
LP GWE + T VYFV+ TK T W P + +D+P D K IY
Sbjct: 366 LPSGWEMRLTNSARVYFVDHNTKTTTWDDPR--LPSALDQDVP---QYKCDFRRKLIYFR 420
Query: 336 RETGNKTYVDPRLAFAKEEKKHVHD 410
+ G + P K + H+ +
Sbjct: 421 SQPGMRPL--PGQCNVKVRRDHIFE 443
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 40.3 bits (90), Expect = 2e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 156 LPPGWEEKSTEDGNVYFVNSYTKKTQWTHP 245
LP GWE + +ED +VYFV+ TK T W+ P
Sbjct: 244 LPAGWEMRLSEDYHVYFVDHSTKTTTWSDP 273
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 279 LPFGWSKTVDETSKTIYVNRETGNKTYVDPR 371
LP GW + E +V+ T T+ DPR
Sbjct: 244 LPAGWEMRLSEDYHVYFVDHSTKTTTWSDPR 274
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 38.7 bits (86), Expect = 7e-04
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 474 GKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIKE 605
G +A++TG+ GIG E A LA G N++ +R E D KE
Sbjct: 57 GYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKE 100
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 38.3 bits (85), Expect = 9e-04
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +3
Query: 168 WEEKSTEDGNVYFVNSYTKKTQWTHPHTGCKKVIPKDLPFGWSKTVDETSKTIYVNRETG 347
W E TED VY+ NS T+K+ W P K W + K + N T
Sbjct: 36 WHEVKTEDSRVYYYNSVTRKSVWEKPEELMNDFEKKLSKLAWKEYATADGKKYWYNVNTR 95
Query: 348 NKTYVDP 368
+ P
Sbjct: 96 ESVWDIP 102
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 468 LSGKYALITGSNTGIGYETAKSLARHGCNI-LFANRNMEATDKA 596
L GK LITG + GIG+ AK+ A G N+ L RN +A + A
Sbjct: 7 LKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYA 50
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 438 TAYQVLHGVDLSGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIK 602
T VL L GK ++ G+ GIG+ A + A+ G N++ + T+KA K
Sbjct: 9 TTAHVLDLFSLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK 63
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 31.9 bits (69), Expect = 0.075
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 156 LPPGWEEKSTEDGNVYFVNSYTKKTQWTHPHTGCKKVIPKDLPFGWSKTVDETSKTIYVN 335
LPPGW E G Y+ N+ KK+ + P + +K + + TS+ ++VN
Sbjct: 5 LPPGWTEHKAPSGIPYYWNAELKKSTYQRP-SFIEKNHSSSVTASQASLAFNTSEKLFVN 63
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 31.9 bits (69), Expect = 0.075
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 468 LSGKYALITGSNTGIGYETAKSLARHG-CNILFANRNMEATDKAIKE 605
L GK LITG+++GIG TA +A+ ++ A R ++ KE
Sbjct: 4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKE 50
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 31.5 bits (68), Expect = 0.099
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 173 RKVNRRWKCLLCKFLYKKDPVDPSSHGLQEGYSKRFTV 286
R V + W C +C F+ DP++P + G + RFT+
Sbjct: 93 RHVEKSWACKICTFINVGDPINPCRNC---GVANRFTI 127
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 31.5 bits (68), Expect = 0.099
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 468 LSGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIK 602
+SGK L+TG IG A+ L + G + R+ME D+ I+
Sbjct: 1 MSGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIR 45
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 480 YALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIKE 605
+ L+TG + G+G AK L G N+ R + +A+ E
Sbjct: 24 HILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAE 65
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 30.7 bits (66), Expect = 0.17
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 477 KYALITGSNTGIGYETAKSL 536
KYALITGSN+G+G+ A L
Sbjct: 5 KYALITGSNSGLGFGIATRL 24
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 29.1 bits (62), Expect = 0.53
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 450 VLHGVDLSGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIKE 605
+L + L GK A++ G GIG+ A G N F N +KA KE
Sbjct: 13 ILDLLSLKGKNAVVFGGARGIGHAICSVFAEAGAN-AFIVYNTTPGEKAAKE 63
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 28.3 bits (60), Expect = 0.92
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 336 RETGNKTYVDPRLAFAKEEKKHVHDFRQRF----DGSSTAYQVLHGVDLSGK 479
RE K+ + RL E+ K ++ Q DGSS VLH +DLS K
Sbjct: 158 RERQEKSDEEQRLRLLDEQIKRAYESAQNNEDNKDGSSREQPVLHEIDLSKK 209
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 468 LSGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAI 599
L+ K L+TG ++GIG A AR G +++ + E D +
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEV 83
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 216 YTKKTQWTHPHTGCK-KVIPKDLPFGWSKTVDETSKTIYVNRETGNKTYVDPRLAFAKEE 392
Y W +T K P+ PF W + VDE+ +T++ + Y+D A A
Sbjct: 1213 YNLMNIWNPEYTNDSIKSNPEGSPFSWLRFVDESPQTLFQTFQNPVVHYLDE--AEASSS 1270
Query: 393 KKHVHDFRQRF 425
K RQ F
Sbjct: 1271 LKEEQLCRQEF 1281
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 486 LITGSNTGIGYETAKSLARHGCNILFANR 572
LITGS+ G+GY K G N++ +R
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSR 37
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 456 HGVDLSGKYALITGSNTG-IGYETAKSLARHGCNIL 560
+G+ KYAL+TG+ G IG + + L G ++
Sbjct: 629 NGITYQDKYALVTGAGAGSIGAQIVEGLLAGGAKVV 664
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 313 PAKQFMSIEKLVIRRM*TQDLLLQKKRRSMCTTLDRGSMGHLQHTRFSMV 462
P K+F+ + + R+ ++ Q+ S+C + R H H FS+V
Sbjct: 2296 PCKKFIPVFYQLAARLMNENSKFQQSLTSICYNVGRNHPYHSLHVLFSLV 2345
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 438 TAYQVLHGVDLSGKYALITGSNTGIGYETAKSLARHGCNILFANR 572
TA + + L + ++TG GI ETA+ L G N+ A R
Sbjct: 626 TARTIHEAIGLGLRIKMLTGDAVGIAKETARQLGM-GTNVYNAER 669
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 111 SSNMQNVLDSDSEDELP-PGWEEKSTEDGNVY--FVNSYTKKTQWTHP 245
S NMQ V DSD + P GW++ V N TKKT++ +P
Sbjct: 134 SKNMQVVTDSDVRKDPPRKGWKKGPYGRAIVVLRMYNKNTKKTRFFYP 181
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 477 KYALITGSNTGIGYETAKSLAR 542
K L+TGS+ GIG TA++L +
Sbjct: 7 KVILLTGSSKGIGLATAEALQK 28
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 468 LSGKYALITGSNTGIGYETAKSLARHGCNILFANR 572
++G ++TG ++GIG + LA G ++ R
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLR 107
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 471 SGKYALITGSNTGIGYETAKSL-ARHGCNILFANRNMEA 584
+ K I G N GIG K L +R G + + R EA
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEA 42
>SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 354
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 577 ILRXANNILHPCLANDLA--VS*PIPVLEPVIKAYLPDKSTP 458
+ + +N+++ P +D++ V+ + + + V K PDKSTP
Sbjct: 305 LAKASNSMIVPASTSDVSGMVAQALSIFKQVSKTTAPDKSTP 346
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 471 SGKYALITGSNTGIGYETAKSLARHGCNILFANRNMEATDKAIKE 605
+ K I G N GIG K L+ ++FA+ ++E
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQE 48
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 471 SGKYALITGSNTGIGYETAKSLARHGCNILFAN-RNMEA 584
+ K I G N GIG K L+ ++FA+ R EA
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEA 42
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -3
Query: 231 GSFLYKNLQSKHFHLLLTFLPSQAV 157
G+FL+KNL +H++ +L + + +
Sbjct: 140 GNFLFKNLDEEHYNEVLNAMTEKRI 164
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 120 MQNVLDSDSEDELPPGWEEKSTEDGNVYFVNSYTKKTQ 233
+++VL D+E + EE +D + NS+++K Q
Sbjct: 163 LEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQ 200
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 364 TQDLLLQKKRRSMCTTLDRGSMGHLQH-TRFSM 459
TQD+LL +++ +TL++ HLQ+ FS+
Sbjct: 282 TQDILLNVNSQNLTSTLEKYKKMHLQNPNNFSL 314
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 65 YYLSGHESTVCN 100
YYL GHES +C+
Sbjct: 92 YYLFGHESNICS 103
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 261 SCSPCEDGSTGSFLYKNLQSKHFHLLLTFLPSQA 160
S SP D +TG LY+N+ ++ H T +P+ A
Sbjct: 67 SISPVYDPATGRLLYRNVNTQVSH---TAIPNPA 97
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 177 KSTEDGNVYFVNSYTKKTQWTHPHTGCKKVIPKDLPFGWSKTVDETSKTIYVNRETGNK 353
K+TED + S K QW + + PK W + +D + K +RE K
Sbjct: 10 KNTEDEILKAAVSKYGKNQWARISSLLVRKTPKQCKARWYEWIDPSIKKTEWSREEDEK 68
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 439 VDDPSNLCLKSCTCFFS 389
++D SNL L SC C FS
Sbjct: 1339 LEDKSNLLLYSCNCKFS 1355
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 511 IPVLEPVIKAYLPDKSTPWRTWY 443
+PVL+P I A P+KS RT+Y
Sbjct: 410 VPVLDPAIYAANPNKSAD-RTYY 431
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,380,293
Number of Sequences: 5004
Number of extensions: 51045
Number of successful extensions: 209
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -