Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17n07
(708 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 8.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 8.7
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 8.7
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 300 LQWLPCLLRMSRPGKKITKK 319
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 368 LQWLPCLLRMSRPGKKITKK 387
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 628 LQWTACSIRQLTIXRKVTNK 687
LQW C +R +K+T K
Sbjct: 368 LQWLPCLLRMSRPGKKITKK 387
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -1
Query: 420 VDRSNTTLALCTGPNCEKYSRSCRWPTVQAR 328
V NT CT + EKY C V+ +
Sbjct: 182 VSMENTENKSCTDSDIEKYKMFCNLENVKLK 212
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 616 MKISLQWTACSIRQLTIXRKVTNKLNN 696
M SLQW++ + RKVT ++ N
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILN 516
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 616 MKISLQWTACSIRQLTIXRKVTNKLNN 696
M SLQW++ + RKVT ++ N
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILN 554
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 254 LHLLEIVSL*VMASTARAARLYVGNLAWTVGHRQLREYFSQFGP 385
+HL EI + A LY+G L+ + R+ RE+ + P
Sbjct: 109 IHLKEIEDTEPILLIAYIYHLYMGLLSGGIILRKKREFMQKIWP 152
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,392
Number of Sequences: 438
Number of extensions: 3675
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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