Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17m18
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065040-1|AAH65040.1|  290|Homo sapiens chromosome 1 open readi...    32   1.4  
BC041843-1|AAH41843.1|  226|Homo sapiens C1orf63 protein protein.      32   1.4  
BC001892-1|AAH01892.1|  290|Homo sapiens chromosome 1 open readi...    32   1.4  
AL031432-3|CAB37992.1|  290|Homo sapiens chromosome 1 open readi...    32   1.4  
AK027318-1|BAB55038.1|  242|Homo sapiens protein ( Homo sapiens ...    32   1.4  
AF267856-1|AAG44725.1|  242|Homo sapiens HT033 protein.                32   1.4  
AF247168-1|AAG44543.1|  242|Homo sapiens NPD014 protein.               32   1.4  

>BC065040-1|AAH65040.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>BC041843-1|AAH41843.1|  226|Homo sapiens C1orf63 protein protein.
          Length = 226

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>BC001892-1|AAH01892.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>AL031432-3|CAB37992.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>AK027318-1|BAB55038.1|  242|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14412 fis, clone HEMBA1004669, weakly similar to
           SON PROTEIN. ).
          Length = 242

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>AF267856-1|AAG44725.1|  242|Homo sapiens HT033 protein.
          Length = 242

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


>AF247168-1|AAG44543.1|  242|Homo sapiens NPD014 protein.
          Length = 242

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 407 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 583
           R H   +S F  +  R KSR R++R H R + R Y + +Y R R      R+     GF 
Sbjct: 44  RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101

Query: 584 RRFAR 598
           RR+ R
Sbjct: 102 RRYYR 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,270,784
Number of Sequences: 237096
Number of extensions: 1839664
Number of successful extensions: 8070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8070
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)