Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17m18
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089435-1|AAL90173.1|  400|Drosophila melanogaster AT25434p pro...    29   6.6  
AE014297-3779|AAN14049.1|  400|Drosophila melanogaster CG31099-P...    29   6.6  
AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA ...    29   6.6  
BT010055-1|AAQ22524.1|  954|Drosophila melanogaster LD16082p pro...    28   8.8  
AF140746-1|AAF22575.1|  954|Drosophila melanogaster Ral guanine ...    28   8.8  
AE014298-2363|AAF48588.1| 1061|Drosophila melanogaster CG13957-P...    28   8.8  
AE014296-2321|AAF49790.2|  954|Drosophila melanogaster CG8865-PA...    28   8.8  

>AY089435-1|AAL90173.1|  400|Drosophila melanogaster AT25434p
           protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +3

Query: 21  FNILNSSDSWEVPKYMKNLFDEMQLEPPAILPLGL*IW*S*HVDIMFASLTSEQXXXXXX 200
           FN+LN SD W V   M    D   +E  A+L   L  + S  +D+ +  L+S +      
Sbjct: 243 FNVLNHSDCW-VNNVMFKFDDSGHVEDTALLDYQLVKYGSPAIDLYYTILSSAEKDIKLA 301

Query: 201 YKFNNYVK 224
            +F+N V+
Sbjct: 302 -QFDNMVQ 308


>AE014297-3779|AAN14049.1|  400|Drosophila melanogaster CG31099-PA
           protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +3

Query: 21  FNILNSSDSWEVPKYMKNLFDEMQLEPPAILPLGL*IW*S*HVDIMFASLTSEQXXXXXX 200
           FN+LN SD W V   M    D   +E  A+L   L  + S  +D+ +  L+S +      
Sbjct: 243 FNVLNHSDCW-VNNVMFKFDDSGHVEDTALLDYQLVKYGSPAIDLYYTILSSAEKDIKLA 301

Query: 201 YKFNNYVK 224
            +F+N V+
Sbjct: 302 -QFDNMVQ 308


>AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA
            protein.
          Length = 3242

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 12   IIYFNILNSSDSWEVPKYMKNLFDEMQLEPPAILPL 119
            I+Y  + +S   WE  K  KN F E+ +   A+L +
Sbjct: 2608 ILYLGVTSSGIIWESKKVTKNRFKELTINENALLEI 2643


>BT010055-1|AAQ22524.1|  954|Drosophila melanogaster LD16082p
           protein.
          Length = 954

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 406 DELDDADAVLRSKRNSVHSSFLLCPLVAFSTRKISARSK 290
           D+LD + AVL ++R  V S   LC     + R +S ++K
Sbjct: 140 DDLDVSSAVLNAERKVVASLKYLCACTGATLRNLSKKTK 178


>AF140746-1|AAF22575.1|  954|Drosophila melanogaster Ral guanine
           nucleotide exchangefactor 2 protein.
          Length = 954

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 406 DELDDADAVLRSKRNSVHSSFLLCPLVAFSTRKISARSK 290
           D+LD + AVL ++R  V S   LC     + R +S ++K
Sbjct: 140 DDLDVSSAVLNAERKVVASLKYLCACTGATLRNLSKKTK 178


>AE014298-2363|AAF48588.1| 1061|Drosophila melanogaster CG13957-PA
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 392 IVQFVRQHVTTTSAFVWKRTRKSR-QRNQRHHV-RPHARNYKK*NYER 529
           I QF+RQ   T S F+     KSR  +  R H    H+++Y+   YER
Sbjct: 767 IYQFLRQKFYTFSTFLHDEQIKSRLLKELRFHTEHKHSKSYQSYPYER 814


>AE014296-2321|AAF49790.2|  954|Drosophila melanogaster CG8865-PA,
           isoform A protein.
          Length = 954

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 406 DELDDADAVLRSKRNSVHSSFLLCPLVAFSTRKISARSK 290
           D+LD + AVL ++R  V S   LC     + R +S ++K
Sbjct: 140 DDLDVSSAVLNAERKVVASLKYLCACTGATLRNLSKKTK 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,927,849
Number of Sequences: 53049
Number of extensions: 579216
Number of successful extensions: 1474
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)