Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17m13
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001585-1|AAN71340.1|  411|Drosophila melanogaster RE26090p pro...    70   2e-12
AE013599-2824|AAM68437.1|  411|Drosophila melanogaster CG15111-P...    69   4e-12
AE013599-2823|AAF57599.2|  393|Drosophila melanogaster CG15111-P...    69   4e-12

>BT001585-1|AAN71340.1|  411|Drosophila melanogaster RE26090p
           protein.
          Length = 411

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 349 VFVFHVAVVPLIFKYSKSFRRNLVFANFVQWPLNVNFEEPSSSGIEGGRN--LSVEYHSK 522
           +F     V+PLIF+YS +F+R ++F  F+++P  ++  +P S G+   RN  ++V+ H +
Sbjct: 41  IFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYITVKDHDQ 100

Query: 523 VDNCPIKIGIWHILPRTSYERLKGNFQVDSD 615
            D   +++G+WH+LP  +  R K   +V+ +
Sbjct: 101 -DEDGVRVGVWHVLPSNAVRRFKSELRVEEE 130


>AE013599-2824|AAM68437.1|  411|Drosophila melanogaster CG15111-PB,
           isoform B protein.
          Length = 411

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 349 VFVFHVAVVPLIFKYSKSFRRNLVFANFVQWPLNVNFEEPSSSGIEGGRN--LSVEYHSK 522
           +F     V+PLIF+YS +F+R ++F  F+++P  ++  +P S G+   RN  ++V+ H +
Sbjct: 41  IFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYITVKDHDQ 100

Query: 523 VDNCPIKIGIWHILPRTSYERLKGNFQVDSD 615
            D   +++G+WH+LP  +  R K   +V+ +
Sbjct: 101 -DEDGVRVGVWHVLPSNAVRRFKRELRVEEE 130


>AE013599-2823|AAF57599.2|  393|Drosophila melanogaster CG15111-PA,
           isoform A protein.
          Length = 393

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 349 VFVFHVAVVPLIFKYSKSFRRNLVFANFVQWPLNVNFEEPSSSGIEGGRN--LSVEYHSK 522
           +F     V+PLIF+YS +F+R ++F  F+++P  ++  +P S G+   RN  ++V+ H +
Sbjct: 23  IFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYITVKDHDQ 82

Query: 523 VDNCPIKIGIWHILPRTSYERLKGNFQVDSD 615
            D   +++G+WH+LP  +  R K   +V+ +
Sbjct: 83  -DEDGVRVGVWHVLPSNAVRRFKRELRVEEE 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,660,296
Number of Sequences: 53049
Number of extensions: 573961
Number of successful extensions: 1191
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)