Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17m11
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA...    30   3.4  
AE013599-3297|AAF46778.1|  297|Drosophila melanogaster CG13490-P...    29   6.0  
BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p pro...    29   7.9  
AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p pro...    29   7.9  
AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p pro...    29   7.9  
AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA...    29   7.9  
AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-P...    29   7.9  
AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA...    29   7.9  

>AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA
           protein.
          Length = 1802

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = -2

Query: 687 QSGFNDMV*LANSPGPPHRSKNVSTCRQT 601
           Q G+N  V LA SP PPHR K VS   QT
Sbjct: 171 QLGYNTQV-LALSPRPPHRIKVVSQGAQT 198


>AE013599-3297|AAF46778.1|  297|Drosophila melanogaster CG13490-PA
           protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
 Frame = +1

Query: 70  WESIRWQILN-GDEIEVSPEHRSLAWRELIINVANNTPLDNTFRTMF---QKADFENFDY 237
           W S  W +++ GD + V P    +  + + ++ A +              Q+  F   DY
Sbjct: 134 WRSGDWSLMDHGDRVTVHPLDGEIYAQIINLSTAYDVYFHGAGDVPSISKQRYTFPESDY 193

Query: 238 NTPIVYNLKTKTLTMYNERIRAALNRPARFNDQTTNVNIAYVFLFFICI 384
            T  +  L+  T    NE  RA   R  RFN +   +    ++ F +C+
Sbjct: 194 TTVELIALEIFT----NEEARATKQRSCRFNYEAEEMMTVPIYSFGLCL 238


>BT001481-1|AAN71236.1|  302|Drosophila melanogaster LD21957p
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 554 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFA 658
           R R   KLL +D+ + +   V   +DLC  PG ++
Sbjct: 22  RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWS 56


>AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 572 KLLEIDKKFHVCRHVDTFLDLCGGPGEF 655
           KLLEID K+ + R  DT L+    PG +
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPGSW 93


>AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p
           protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 554 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 649
           R R   KL+++++KF   +     LDLC  PG
Sbjct: 25  RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA
           protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 554 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 649
           R R   KL+++++KF   +     LDLC  PG
Sbjct: 25  RSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-PA
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 572 KLLEIDKKFHVCRHVDTFLDLCGGPGEF 655
           KLLEID K+ + R  DT L+    PG +
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPGSW 93


>AE014297-2295|AAF55380.1|  302|Drosophila melanogaster CG5220-PA
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 554 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFA 658
           R R   KLL +D+ + +   V   +DLC  PG ++
Sbjct: 22  RARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWS 56


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,353,242
Number of Sequences: 53049
Number of extensions: 636692
Number of successful extensions: 1611
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)