Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17l20
(586 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 113 2e-26
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 57 2e-09
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 55 7e-09
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 52 5e-08
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 51 1e-07
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 49 6e-07
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 47 2e-06
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 46 3e-06
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 46 5e-06
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 44 2e-05
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 44 2e-05
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 44 2e-05
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 43 3e-05
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 43 4e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 42 7e-05
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 41 1e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 41 2e-04
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 40 4e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 40 4e-04
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 39 6e-04
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 39 6e-04
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 38 8e-04
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 38 8e-04
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 38 0.001
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 37 0.002
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 36 0.003
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 36 0.003
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 36 0.003
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.006
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 36 0.006
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 36 0.006
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 36 0.006
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 34 0.013
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 34 0.018
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 33 0.023
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 33 0.031
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 33 0.031
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 33 0.041
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.041
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 33 0.041
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 32 0.054
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 32 0.071
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 32 0.071
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 31 0.12
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 30 0.22
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 29 0.38
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 0.38
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.50
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 29 0.66
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 28 0.87
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 1.2
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 28 1.2
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 28 1.2
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 27 2.0
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 27 2.0
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 2.7
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 26 3.5
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 26 3.5
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.7
SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pomb... 26 4.7
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 4.7
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 25 6.2
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 25 6.2
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 6.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 25 8.1
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 113 bits (271), Expect = 2e-26
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Frame = +2
Query: 122 VSFPFKKTNKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCS 301
+S P + F + +T + +W+ +PV+ KE+ AI + FS PY FA T
Sbjct: 1 MSAPAGRLQPQRFAALPNPVTAENKFWRSFKVPVVAKEYSAITSIHFSAESPYDFAVTSG 60
Query: 302 VRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFT 481
RVQ+Y ++ V K I++F + AY G R DG+LL+AG V++FD+ ++++LR
Sbjct: 61 ARVQIYGASSRSVKKTIARFKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALD 120
Query: 482 GHTGPVHRT-FFTKDQLKIISYSDDKSVGLWDIST 583
H PVH T F +S SDDK+V +WD+ST
Sbjct: 121 AHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLST 155
Score = 30.7 bits (66), Expect = 0.16
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +2
Query: 308 VQVYDPVTKVVAKNIS--KFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFT 481
VQ++D T+ + + + +F C A+ L +GS++ VK++D+ + V +
Sbjct: 105 VQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFL-SGSDDKTVKVWDLSTGAVQYDLS 163
Query: 482 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
GH V RT +++S D ++ LWD
Sbjct: 164 GHEDYV-RTASWMSATRLVSGGYDGTIRLWD 193
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 56.8 bits (131), Expect = 2e-09
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F DG+ L G E+ ++++D+ K V R+ TGH ++ F+KD ++S S D++V
Sbjct: 342 FSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVC 401
Query: 566 LWDI 577
LWD+
Sbjct: 402 LWDV 405
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = +2
Query: 260 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVK 439
FSP Y +++++D K V + ++ + Y F DG+ LV+GS + V
Sbjct: 342 FSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVC 401
Query: 440 LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
L+DV++ + G V F+ D I + S DK + +W S
Sbjct: 402 LWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWTSS 447
Score = 36.7 bits (81), Expect = 0.002
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Frame = +2
Query: 260 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVK 439
FSP + A + ++++ +V + + E+ Y F DG+ LV+GS + +K
Sbjct: 425 FSPDGQFIAAGSLDKVIRIWTSSGTLV-EQLHGHEESVYSVAFSPDGKYLVSGSLDNTIK 483
Query: 440 LFDVQS-KNVL-----------RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
L+++Q NV + FTGH + + D IIS S D+++ W
Sbjct: 484 LWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 539
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F DG+ + AGS + ++++ S ++ GH V+ F+ D ++S S D ++
Sbjct: 425 FSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIK 483
Query: 566 LWDI 577
LW++
Sbjct: 484 LWEL 487
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 55.2 bits (127), Expect = 7e-09
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F DG+ LV G+E+ +KL+D+ ++ V VF+GH ++ F+ + I+S S D++
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 566 LWDIST 583
LWD+ T
Sbjct: 428 LWDVET 433
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/107 (24%), Positives = 47/107 (43%)
Frame = +2
Query: 260 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVK 439
FSP Y T +++++D T+ V S + Y F +GR +V+GS + +
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 440 LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
L+DV++ + G DQ + S D+ + +W +S
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAISPNDQFIAVG-SLDQIIRVWSVS 473
Score = 35.9 bits (79), Expect = 0.004
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Frame = +2
Query: 263 SPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKL 442
SP + + + ++V+ V+ + + + E+ Y F D +L++GS + +K+
Sbjct: 452 SPNDQFIAVGSLDQIIRVWS-VSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKV 510
Query: 443 FDVQSKNVLRV------------FTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+++Q+ + + +TGHT V + D +S S D+S+ WD+ T
Sbjct: 511 WELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQT 569
Score = 33.5 bits (73), Expect = 0.023
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQS-KNVLRVFTGHTGP-----VHRTFFTKDQLKIISYS 547
F +G+ L G +AA +FDVQ+ K + + P V F+ D +++ +
Sbjct: 321 FSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGT 379
Query: 548 DDKSVGLWDISTE 586
+D+ + LWD+ST+
Sbjct: 380 EDRQIKLWDLSTQ 392
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D R ++GS++ +++ +D+Q+ GH V F+ D + S S D +W
Sbjct: 549 DSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Query: 575 I 577
I
Sbjct: 609 I 609
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 52.4 bits (120), Expect = 5e-08
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 245 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSE 424
+++ FSP A+ V+++D T + V A Y + D RLLV+ S+
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ 451
Query: 425 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
+ +K++DV+SK + GH V ++ D ++ S DK+V +W
Sbjct: 452 DTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 44.4 bits (100), Expect = 1e-05
Identities = 18/67 (26%), Positives = 38/67 (56%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F DGR + S +++V+L+D ++ L GH V++ ++ D ++S S D ++
Sbjct: 397 FSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLK 456
Query: 566 LWDISTE 586
+WD+ ++
Sbjct: 457 VWDVRSK 463
Score = 39.1 bits (87), Expect = 5e-04
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 374 YGGCFRADGRLLVAGSEEAAVKLFDVQ-SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD 550
Y C + G LV+ S++ + L+D Q S + GH V+ F+ D I + S
Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 551 DKSVGLWDIST 583
D SV LWD T
Sbjct: 410 DSSVRLWDGKT 420
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
LL +GS++ V++++V+ + +L +GHT P+ + Q I S S DK++ +WD
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW-GGQNWIYSSSYDKTIRIWD 296
Score = 31.5 bits (68), Expect = 0.094
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 407 LVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
LV GS + +L+D ++ + GHT V + D I + S D ++ WD
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWD 205
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 50.8 bits (116), Expect = 1e-07
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDV-QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
F G LL++GS + +K+++V +++LR F GH P+ F++D +S S DK++
Sbjct: 275 FPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTI 334
Query: 563 GLWD 574
LWD
Sbjct: 335 KLWD 338
Score = 39.9 bits (89), Expect = 3e-04
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +2
Query: 410 VAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+AG+ + + FD++S ++++ + H G ++ F ++ + ++ SDD S+ W+ T
Sbjct: 370 LAGTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGT 427
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD--DKS 559
F DGR + +G +D ++ ++ H+GPV F + ++ S D S
Sbjct: 494 FSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGS 553
Query: 560 VGLWD 574
+ WD
Sbjct: 554 IKYWD 558
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 48.8 bits (111), Expect = 6e-07
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
C D LLV+GS + VKL+ + + GHTGPV+ +D+ ++S SDD ++
Sbjct: 358 CLTFDSTLLVSGSADCTVKLWHFSGGKRITL-RGHTGPVNSVRIIRDRGLVLSGSDDSTI 416
Query: 563 GLWDIST 583
+W + T
Sbjct: 417 KIWSLET 423
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
C + +L +GS +A ++L+++ + + + GH+ V T DQ K+IS S DK++
Sbjct: 278 CLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV--TCLQFDQCKLISGSMDKTI 335
Query: 563 GLWDIST 583
+W+ T
Sbjct: 336 RIWNYRT 342
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D L+++GS+++ +K++ +++ L F+ H GPV +L S S D ++ WD
Sbjct: 403 DRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRL--FSCSLDGTIKQWD 460
Query: 575 I 577
I
Sbjct: 461 I 461
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 46.8 bits (106), Expect = 2e-06
Identities = 25/114 (21%), Positives = 60/114 (52%)
Frame = +2
Query: 239 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 418
G + + F P +P + + +V V++ ++ + ++ ++ F + +++
Sbjct: 54 GPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSC 113
Query: 419 SEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
S++ +++++ QS+N + + TGH+ V F + I+S S D++V +WDIS
Sbjct: 114 SDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 371 AYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD 550
A G F ++ ++L+D + +L F GH GPV F Q +S D
Sbjct: 14 AKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGD 73
Query: 551 DKSVGLWD 574
D V +W+
Sbjct: 74 DYKVNVWN 81
Score = 33.5 bits (73), Expect = 0.023
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
L+++ ++ VKL+ + + V T GH V F Q I+S S+DK++ +WD+
Sbjct: 226 LILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDL 285
Query: 578 S 580
+
Sbjct: 286 N 286
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 46.4 bits (105), Expect = 3e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 374 YGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDD 553
YG F D + L++ SE+A+ +L+ V +K L + GHTGPV F + S D
Sbjct: 383 YGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHD 442
Query: 554 KSVGLW 571
++ LW
Sbjct: 443 QTAQLW 448
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F + ++ GS + +L+DV + +RVF GHT PV D + S + +
Sbjct: 471 FHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 566 LWDIST 583
LWDI T
Sbjct: 531 LWDIGT 536
Score = 42.3 bits (95), Expect = 5e-05
Identities = 21/121 (17%), Positives = 47/121 (38%)
Frame = +2
Query: 215 LPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRA 394
L V +D + F P Y + +++D + + +
Sbjct: 456 LRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAP 515
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
DG + + E + L+D+ + ++ GH G ++ F+++ ++S D +V WD
Sbjct: 516 DGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Query: 575 I 577
+
Sbjct: 576 V 576
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/118 (22%), Positives = 43/118 (36%)
Frame = +2
Query: 224 LVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGR 403
L+ G + FSP Y + + +++ TK + F G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
S + +L+ LRVF GH V F + +++ S DK+ LWD+
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Score = 36.3 bits (80), Expect = 0.003
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 485 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 586
H+GPV+ T F+ D ++S S+D S LW + T+
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK 411
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 45.6 bits (103), Expect = 5e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
C + D ++V+GS++ V ++DV S+ +L GH+G V F + + ++S S D ++
Sbjct: 226 CVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTI 285
Query: 563 GLWD 574
+WD
Sbjct: 286 IIWD 289
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
LLV+GS ++ + ++D Q++ L+V+ GHT V +++ IIS S D + +W
Sbjct: 275 LLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENY--IISSSRDHTARVW 328
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 467 LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+ V GH V+ ++ I++ S D+++ WDI+T
Sbjct: 340 MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
DGR++ + S++ +KL+D + V+ V GH V F ++ S S D+++ +W+
Sbjct: 476 DGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN 535
Query: 575 ISTE 586
+ T+
Sbjct: 536 VDTQ 539
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
+L +G++++ V+L+D+ S + VF GH+ + F ++S S DK+V +W+I
Sbjct: 161 VLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/92 (19%), Positives = 45/92 (48%)
Frame = +2
Query: 308 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGH 487
++++D T V + + F R L +GS + +++++V ++ ++ GH
Sbjct: 489 IKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGH 548
Query: 488 TGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
TG + + + +++S + D V +W +S+
Sbjct: 549 TGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Score = 40.3 bits (90), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK--IISYSDDKSVGLWDI 577
LL G E VK++D+ V F GH G + F K Q + S +DD V LWD+
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDL 176
Query: 578 ST 583
++
Sbjct: 177 NS 178
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 455 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
S + H V+ +KD I S S DK++ LWD ST
Sbjct: 454 SNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSST 496
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D L V + E + + V V GHT V ++D + + + + D +V LW+
Sbjct: 334 DDHLAVCSNTEF-IDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWN 392
Query: 575 ISTE 586
++ E
Sbjct: 393 LNIE 396
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 43.6 bits (98), Expect = 2e-05
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 245 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSE 424
+++L P Y AA+ + + ++ ++V +++ + + DG L VAG E
Sbjct: 298 VNFLQAHPSGEYLLAAS-NEKCYIFSLKSQVYNITVAQHITSL---AVHPDGNLFVAGLE 353
Query: 425 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKD-QLKIISYSDDKSVGLWDI 577
++ F+ S N L F H+ PV F ++ +++ +DD + +WD+
Sbjct: 354 NGELRFFETSSGNELTKFGPHSSPVKTLQFGENGYWLVVTTNDDSDIFIWDL 405
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/109 (22%), Positives = 50/109 (45%)
Frame = +2
Query: 254 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAA 433
L SP PY F+ V+ +D T V ++ + Y +LV +A
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAV 270
Query: 434 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
+++D++++ + V +GH V + ++++ S D ++ LWD++
Sbjct: 271 ARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLA 319
Score = 31.5 bits (68), Expect = 0.094
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 416 GSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
G+ + +K++D+ S + TGH V + + S +DK V WD+ T
Sbjct: 181 GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLET 236
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
+ +DG+ ++ G+++ +K++D+ S + FT HT V F+K + S S D SV
Sbjct: 347 YSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVR 406
Query: 566 LWDI 577
WD+
Sbjct: 407 AWDL 410
Score = 42.7 bits (96), Expect = 4e-05
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 383 CFRAD--GRLLVAGSEEA-AVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDD 553
C D G ++ AGS+++ + ++ VQ+ +L GH GPV F + S S D
Sbjct: 429 CIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWD 488
Query: 554 KSVGLWDI 577
K+V +WDI
Sbjct: 489 KTVRIWDI 496
Score = 38.3 bits (85), Expect = 8e-04
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = +2
Query: 254 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV-EAAYGGCF--------RADGRL 406
++FSP +FA + +QV+ + + + FV Y G F AD R
Sbjct: 102 IEFSP-NGKFFAVSLGKLIQVWRTPNSLEEREFAPFVLHREYTGHFDDIVSISWSADSRF 160
Query: 407 LVAGSEEAAVKLFDVQSKNVLR--VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
++ S++ +L V TGH V FF+KDQ I + S D ++ +W S
Sbjct: 161 FISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYS 220
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/82 (20%), Positives = 34/82 (41%)
Frame = +2
Query: 236 FGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVA 415
+ A+ L +S +++V+D + ++ A G CF G +L +
Sbjct: 339 YDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFS 398
Query: 416 GSEEAAVKLFDVQSKNVLRVFT 481
S + +V+ +D+ R FT
Sbjct: 399 SSLDGSVRAWDLIRYRNFRTFT 420
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/60 (18%), Positives = 32/60 (53%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+ + S+ + +++ QS++ + H + ++ D +II+ +DD + +WD+++
Sbjct: 311 IAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNS 370
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 290 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVL 469
+TCS R+ +YD T V+ +++ + + F G LV GS + V+++D+++
Sbjct: 422 STCSPRINIYDTKTGVLIRSLEEHEGDVW--TFEYVGDTLVTGSTDRTVRVWDLRTGECK 479
Query: 470 RVFTGHTGPV 499
+VF GHT +
Sbjct: 480 QVFYGHTSTI 489
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/92 (20%), Positives = 44/92 (47%)
Frame = +2
Query: 308 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGH 487
++V+ T V + V Y + ++ +A +++++++S +L+ GH
Sbjct: 599 LRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGH 658
Query: 488 TGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+ V + F ++ L S D S+ +WD++T
Sbjct: 659 SNLVSQVTFNQNILVSASAPPDTSLRVWDLNT 690
Score = 33.1 bits (72), Expect = 0.031
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +2
Query: 398 GRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
G L+V+ S + ++++ + L V GH G V+ + + IS D + +W++
Sbjct: 587 GDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNL 646
Query: 578 ST 583
+
Sbjct: 647 ES 648
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 41.9 bits (94), Expect = 7e-05
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 398 GRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
G +LV+GS +++++++ V + L GH+ ++ + ++ IS S DKS+ +WD+
Sbjct: 517 GDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
Query: 578 ST 583
ST
Sbjct: 577 ST 578
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
D L+ ++ +K++D Q+K +R+ GHT V FF IIS S+D +V +W
Sbjct: 197 DKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
Score = 35.1 bits (77), Expect = 0.008
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 254 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAA 433
+DF P EP+ A+ + +V +++ T+ + ++ F A V GS++
Sbjct: 20 VDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVCGSDDFQ 79
Query: 434 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL--WDIS 580
V++++ + + F H + Q +++ SDD ++ WD+S
Sbjct: 80 VRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMS 130
Score = 31.9 bits (69), Expect = 0.071
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 245 IDYLDFSPV--EPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 418
++Y+++ P +PY A ++V+D TK + + F + ++++G
Sbjct: 187 VNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISG 246
Query: 419 SEEAAVKLFDVQSKNVLRVF 478
SE+ VK++ S ++++ +
Sbjct: 247 SEDGTVKIWHTLSYSLIKSY 266
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F + L GS + +++DV++ +RVF H PV + D L + S + +
Sbjct: 495 FHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIK 554
Query: 566 LWDI 577
+WD+
Sbjct: 555 VWDL 558
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F G S + +L+DV+ LRVF GH V F + + + S D +
Sbjct: 453 FSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTR 512
Query: 566 LWDIST 583
+WD+ T
Sbjct: 513 MWDVRT 518
Score = 31.9 bits (69), Expect = 0.071
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +2
Query: 374 YGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDD 553
+G +++ SE+ +L+ +K+ + + GH P+ F+ + S D
Sbjct: 407 FGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHD 466
Query: 554 KSVGLWDI 577
++ LWD+
Sbjct: 467 QTARLWDV 474
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 374 YGGC--FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 547
+G C + +GR +V+G + + L ++ + V +GHT PV F+ + +
Sbjct: 147 FGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAG 206
Query: 548 DDKSVGLWDI 577
D K + ++D+
Sbjct: 207 DSKMITIYDV 216
Score = 28.7 bits (61), Expect = 0.66
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F LL A + + ++DV S + + GH + F ++S + +
Sbjct: 195 FSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIK 254
Query: 566 LWDIST 583
+WDI T
Sbjct: 255 IWDIDT 260
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D ++ S + ++L+D++ F GHT V + D +++S S DK++ +W+
Sbjct: 74 DSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
Query: 575 I 577
I
Sbjct: 134 I 134
Score = 31.9 bits (69), Expect = 0.071
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTG-HTGPVHRTFFTK--DQLKIISYSDDKSVG 565
D R +V+GS + +K++++ + G H+ V F+ D L +S DK+V
Sbjct: 116 DNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVK 175
Query: 566 LWDIST 583
+WD+ T
Sbjct: 176 VWDLET 181
Score = 31.5 bits (68), Expect = 0.094
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D V+ + AVK++D+++ ++ GHTG V + D S D ++ LWD
Sbjct: 161 DNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Query: 575 IS 580
++
Sbjct: 221 LN 222
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNV-----LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 568
+L++GS + ++ L+++ +V R TGH+ V + D +S S DK++ L
Sbjct: 30 ILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRL 89
Query: 569 WDI 577
WD+
Sbjct: 90 WDL 92
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 38.7 bits (86), Expect = 6e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQS--KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKS 559
F L A S ++ V++++VQ+ +++ + H GPV +++D K+ S S DKS
Sbjct: 38 FSPQAEYLAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKS 97
Query: 560 VGLWDIST 583
++DI T
Sbjct: 98 AKVFDIQT 105
Score = 32.3 bits (70), Expect = 0.054
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +2
Query: 242 AIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGC----FRADGRLL 409
+I L FSP Y A++ +V++Y+ + ++I K + G + DG +
Sbjct: 32 SISDLAFSPQAEYLAASSWDSKVRIYE--VQATGQSIGKALYEHQGPVLSVNWSRDGTKV 89
Query: 410 VAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK---DQLKIISYSDDKSVGLWDI 577
+GS + + K+FD+Q+ +V H V F + + + S DK++ WD+
Sbjct: 90 ASGSVDKSAKVFDIQTGQNQQV-AAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWDL 147
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 38.7 bits (86), Expect = 6e-04
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 239 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 418
G I L F A+ +Q+Y+ ++ K+++ A+ G F L+
Sbjct: 27 GEITSLSFDDSGELCLASCTDDTLQLYNCISGKFVKSLASKKYGAHLGRFTHHSNSLIHA 86
Query: 419 S--EEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
S E+ V+ DV + LR F GH V + +S S D ++ LWD+
Sbjct: 87 STKEDNTVRYLDVVTNRYLRYFPGHKQTVTSIDVSPADETFLSASLDNTIRLWDL 141
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 38.3 bits (85), Expect = 8e-04
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
+ G+ ++A E V+L++V+S + + GH + D K S DK +
Sbjct: 22 YNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQ 81
Query: 566 LWDIST 583
+WD++T
Sbjct: 82 VWDVNT 87
Score = 29.5 bits (63), Expect = 0.38
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 434 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
++++DV + V R GH ++ + +D + S S D V LWD
Sbjct: 80 IQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
Score = 29.1 bits (62), Expect = 0.50
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 419 SEEAAVKLFDVQSKNVLRVFTGHTGPVHR--TFFTKDQLKIISYSDDKSVGLWDISTE 586
S +++ L D ++ +L+ + G +R + F + + + S S+D V LWD+ E
Sbjct: 199 SLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENE 256
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 38.3 bits (85), Expect = 8e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
DGR L++G VK F+ NV ++ H V F+ + K ++ SDD S+ +W+
Sbjct: 134 DGRWLISGDGGGMVKYFEPNLNNV-KIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWN 192
Query: 575 --ISTE 586
+STE
Sbjct: 193 FHMSTE 198
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQS-KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
+GR L + S++ +FDV + K V R+ GH V ++ D ++S S DKSV LW
Sbjct: 224 NGRYLASASKDKTAIIFDVVNLKRVFRLI-GHIDTVAYIRWSPDDRYLLSCSCDKSVILW 282
Query: 572 DIST 583
D T
Sbjct: 283 DAFT 286
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 377 GGCFRA-DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK-DQLKIISYSD 550
G CF D +++GSE+ ++++ +S +L +GH V+ + D + S D
Sbjct: 432 GSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGD 491
Query: 551 DKSVGLW 571
D +V +W
Sbjct: 492 DNTVRIW 498
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +2
Query: 332 KVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTF 511
K+V +++ + Y C+ D L+AG+ + +++L+D + +L H+ V
Sbjct: 121 KIVCRSMGSEI---YDLCWSVDSNFLIAGAMDNSLRLYDAHTGQLLTQKFDHSHYVQGVC 177
Query: 512 FTKDQLKIISYSDDKSVGLWDISTE 586
+ I+S S D+S+ L++I E
Sbjct: 178 WDPLNQYIVSESSDRSICLYEIQEE 202
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
+ DG LL + +++ + ++ + L + GHTG + K ++S + D ++
Sbjct: 18 YNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMR 77
Query: 566 LWDIST 583
LWD+ T
Sbjct: 78 LWDVKT 83
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 407 LVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
+ +G+ + ++++D++ +R F GHT P+ F + L SY D SV +WD+
Sbjct: 509 VASGTVDGLIRIWDLRIGLPVRSFIGHTAPISSLQFDSNHLYSGSY--DNSVRIWDL 563
Score = 34.7 bits (76), Expect = 0.010
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 461 NVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
N V T HT PV + D + +I+ +DDK+V WDI T
Sbjct: 426 NATNVLTSHTAPVTALALSSDDV-LITGADDKTVRQWDIVT 465
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 36.3 bits (80), Expect = 0.003
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 275 PYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGC-FRADGRLLVAGSEEAAVKLFDV 451
P A+ V +YD + K++ E A C F + L+ + ++ +DV
Sbjct: 298 PICACASVDGTVALYDSASLKFRKSLPH--EQAVIDCKFLPNTPYLLTACADCVIRKWDV 355
Query: 452 QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
+S +L +TGH P+ T D ++++ SDD + ++D
Sbjct: 356 RSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
Score = 31.5 bits (68), Expect = 0.094
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 398 GRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQL--KIISYSDDKSVGLW 571
G L AG + ++ ++ + S V++V GHT PV+ F + ++ + D ++ +W
Sbjct: 158 GLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVW 217
Query: 572 DIST 583
+ +T
Sbjct: 218 NPAT 221
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.006
Identities = 20/84 (23%), Positives = 41/84 (48%)
Frame = +2
Query: 308 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGH 487
+Q++D V+K ++ + DGR ++ S +A +KL+ ++++ L F H
Sbjct: 198 IQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSFIAH 257
Query: 488 TGPVHRTFFTKDQLKIISYSDDKS 559
+ V + LK+ Y+ D+S
Sbjct: 258 SDSVWALYSEHPDLKVF-YAGDRS 280
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 392 ADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
A+ ++ G + ++L+D SK + GHT V + D I++ S D ++ LW
Sbjct: 184 ANNNIIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLW 243
Query: 572 DISTE 586
+ +
Sbjct: 244 SLRAQ 248
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 35.5 bits (78), Expect = 0.006
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 254 LDFSPVEPYYFAATCSVR-VQVYDPVTKVVAKNISK-FVEAAYGGCFRADGRLLVAGSEE 427
+ ++P+E + F A + +YD A ++ K V A F G+ V+GS +
Sbjct: 235 ISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYD 294
Query: 428 AAVKLFDVQSKNVLRVFTGHTGPVHRTF---FTKDQLKIISYSDDKSVGLW 571
+++++V+ + V+ HT + R F+ D I S SDD +V LW
Sbjct: 295 KTIRIYNVREGHSRDVY--HTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLW 343
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 389 RADGRL--LVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
R DG++ + GS + +K ++V + + GHT V +++ ++S S D S+
Sbjct: 97 RKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASL 156
Query: 563 GLWDISTE 586
+WD+S++
Sbjct: 157 IVWDVSSQ 164
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 437 KLFDVQSKNVLRVFTGHTGPV---HRTFFTKD--QLKIISYSDDKSVGLWDIST 583
KL+D++ + + GH+GPV KD I + S D ++ W++ST
Sbjct: 68 KLYDLEINKTCKTYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVST 121
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F +G L +G +V ++D+ + +V RV TGHT + ++ +++ S D
Sbjct: 32 FSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCI 91
Query: 566 LWDI 577
LWD+
Sbjct: 92 LWDL 95
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 34.3 bits (75), Expect = 0.013
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 308 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKN-VLRVFTG 484
V +YD ++ + ++ A GC + +L +GS A+ DV+ N + G
Sbjct: 245 VDIYDVESQTKLRTMAG--HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQG 302
Query: 485 HTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
H+ V + D L++ S +D V +WD
Sbjct: 303 HSSEVCGLAWRSDGLQLASGGNDNVVQIWD 332
Score = 28.7 bits (61), Expect = 0.66
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPV 499
DG L G V ++DV+S+ LR GH V
Sbjct: 232 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARV 266
Score = 28.3 bits (60), Expect = 0.87
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 377 GGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD-- 550
G +R+DG L +G + V+++D +S T H V + Q +++
Sbjct: 309 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 368
Query: 551 -DKSVGLWDIST 583
DK + W+ +T
Sbjct: 369 MDKQIHFWNAAT 380
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 33.9 bits (74), Expect = 0.018
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 398 GRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
G + G + A+K++D+++ + V GH + +KD ++S S D +V ++D+
Sbjct: 189 GTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDV 248
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.5 bits (73), Expect = 0.023
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +2
Query: 245 IDYLDFSPVEPYYFAATCSV--RVQVYDPVTKVVAKNISKFVEAAYGGCF-RADGRLLVA 415
I+ +D+S Y A TCS VQ+YD + I+ F F D LL++
Sbjct: 24 INSIDYSD-SGEYVATTCSADDTVQIYDALDPKQVHTITCFETGIEVARFTHHDHNLLLS 82
Query: 416 GSE-EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
++ ++ + + F+GHT V + + + +S ++DK++ LW ++
Sbjct: 83 TTKGNKDIQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQFVSTANDKTLKLWKMN 138
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 33.1 bits (72), Expect = 0.031
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVGLWDI 577
L+ ++++L D+QS + +GHTG V + K++ + S S D + LWDI
Sbjct: 161 LIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDI 219
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 33.1 bits (72), Expect = 0.031
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQ--SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDK 556
C D + L A V+L+D+ S+ L F GHT V F D + + S+D
Sbjct: 47 CISPDKKFLAAAGNPH-VRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDG 105
Query: 557 SVGLWDI 577
+V +WD+
Sbjct: 106 TVKVWDM 112
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVL--RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 568
D + L S +A V ++ + + + R GH V F+ D +++ S D L
Sbjct: 226 DVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARL 285
Query: 569 WDIST 583
W++S+
Sbjct: 286 WELSS 290
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 32.7 bits (71), Expect = 0.041
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 392 ADGRLLVAGSEEAAVKLFDVQSKNVLR--VFTGHTGPVHRTFFT--KDQLKIISYSDDKS 559
ADG L++GS++ + ++DV ++ R + TGH + F + +I+S S DK
Sbjct: 55 ADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKL 114
Query: 560 VGLWDIST 583
+ L+D+ +
Sbjct: 115 IKLFDLDS 122
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 479 TGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 586
TGHTG V+ ++ D ++S SDD + +WD+ E
Sbjct: 42 TGHTGCVNTLDWSADGEFLLSGSDDTRLIVWDVFNE 77
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.041
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +2
Query: 401 RLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 577
+ L + S++ ++++D + + +R GHT V F ++S S D++V +W++
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/58 (20%), Positives = 26/58 (44%)
Frame = +2
Query: 401 RLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
R + S + +K++ + + GH + + + + S SDDK++ +WD
Sbjct: 67 RWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 32.7 bits (71), Expect = 0.041
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = +2
Query: 404 LLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
L+ ++ +++ DVQ++ ++R GH+ + F+ +++ S D ++ WD+ T
Sbjct: 544 LVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPT 603
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPV--HRTFFTKDQLKIISYSDDKSVGL 568
D +LV + ++ +++++++ K++ F GH +R +F D +I S+D V +
Sbjct: 460 DTEMLVT-TNDSRIRIYNLRDKSLELKFKGHANAQSQNRAYFDDDGNYVICGSEDHQVFI 518
Query: 569 WDI 577
WD+
Sbjct: 519 WDL 521
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.9 bits (69), Expect = 0.071
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
DGR + A + VK++ + S GH PV + D +++ S DK+V +W
Sbjct: 545 DGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWG 604
Query: 575 I 577
+
Sbjct: 605 L 605
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +2
Query: 392 ADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
+D LL G +++ +KL+D+ ++ + H G + + D + ++ V +W
Sbjct: 184 SDSFLLSVG-KDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVW 242
Query: 572 DIS 580
+IS
Sbjct: 243 EIS 245
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 362 VEAAY--GGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKI 535
+E Y F + + +V+ + ++++D+ S +++ H G + D
Sbjct: 433 IECGYVLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYF 492
Query: 536 ISYSDDKSVGLWDIST 583
+ S D +V LW + +
Sbjct: 493 ATASADHTVKLWSLKS 508
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
C + G + +++L+ + +L GH V F K ++ S S D +
Sbjct: 71 CIANFDEMYAVGYADGSIRLW--KDGELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDI 128
Query: 563 GLWDISTE 586
+WDI E
Sbjct: 129 IVWDIVAE 136
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 31.9 bits (69), Expect = 0.071
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVH-RTFF--TKDQLKIISYS--D 550
F ADG LV S + V+++D ++ + V GH G + R + + D+ +S
Sbjct: 184 FNADGTRLVTTSRDKKVRVWDPRTDKPVSVGNGHAGAKNPRVVWLGSLDRFATTGFSKMS 243
Query: 551 DKSVGLWD 574
D+ + LWD
Sbjct: 244 DRQIALWD 251
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 31.1 bits (67), Expect = 0.12
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 455 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
+++ L + GHTGPV F+ D S D ++ WD+ T
Sbjct: 258 ARSPLILCEGHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLIT 300
Score = 29.1 bits (62), Expect = 0.50
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 452 QSKNVLR-VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
+S +L+ +F GH V R + IS S D +VG+WD
Sbjct: 184 KSSGILQTLFVGHKDIVERVRSLESSSVFISASADNTVGIWD 225
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 30.3 bits (65), Expect = 0.22
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 377 GGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVF 478
G CF D + L SE +KLFD ++VL VF
Sbjct: 327 GFCFSPDYQYLALVSERGTLKLFDFVKEHVLDVF 360
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 29.5 bits (63), Expect = 0.38
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 485 HTGPVHRTFFTK-DQLKIISYSDDKSVGLWDI 577
H+GP+H F + + + S DK++ LWD+
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDL 311
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 29.5 bits (63), Expect = 0.38
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 541
CF L G+ + AVK++D++ N+ +F T +H+ + D L ++
Sbjct: 306 CFSKGNLFLYTGAFDNAVKVWDMEG-NLCGIFNAPTDYIHKLALSDDDLLAVA 357
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.50
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F G+LL ++ +++D S + TGH + T D + + S D+ V
Sbjct: 241 FSKSGKLLFIAKDKTC-EVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVR 299
Query: 566 LWDIS 580
LW S
Sbjct: 300 LWSSS 304
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 28.7 bits (61), Expect = 0.66
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Frame = +2
Query: 233 EFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGG---------C 385
E G I DF P + T + R D VTK A + + E AY G
Sbjct: 138 EDGYIRKYDFFPSINGDLSLTVAQRHPFVDTVTK--AGILLNYWENAYDGNKPSSVYSLA 195
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKS 559
+ G +++G + L+ + + V + HT PV + K++S S DK
Sbjct: 196 AHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLALHGSEKKVLSGSWDKM 255
Query: 560 VGLWDIST 583
V WD++T
Sbjct: 256 VYYWDLNT 263
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 28.3 bits (60), Expect = 0.87
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
+G ++A + + V +++ S L VF HT PV F+ + + + V +W
Sbjct: 444 EGTPILAVASNSIVSMYNAISLQQLAVFMRHTAPVSALSFSHNGRYLATGDTSGGVCIWS 503
Query: 575 IST 583
T
Sbjct: 504 CKT 506
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 407 LVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
L G+ + V L+ L GH V R F ++S S D + LWD+ T
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT 296
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 565
F G LV+ S + +L+DV + L + GH+ + D + S +D
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGR 332
Query: 566 LWDI 577
+WD+
Sbjct: 333 IWDL 336
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 230 KEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLL 409
K G++ + F P PY AT V++Y+ V + + K + V+ + G +
Sbjct: 567 KSKGSVQAVTFHPTMPYLLVAT-QRYVRIYNLVKQELVKTLLTGVKWVSSLSVHSSGDHV 625
Query: 410 VAGSEEAAVKLFDV 451
+ GS + + FD+
Sbjct: 626 IIGSYDKRLCWFDL 639
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/27 (33%), Positives = 21/27 (77%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRV 475
D RL + G+++ ++K+FDV+S +++ +
Sbjct: 101 DERLFITGADDKSLKVFDVESIDLVNI 127
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 197 YWKKLGLPVL--VKEFGAIDYLDFSPVEPYY 283
YW L PV +K+ + FSP+ PYY
Sbjct: 259 YWPALAAPVYPSMKDVPNNPFTPFSPINPYY 289
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 27.1 bits (57), Expect = 2.0
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Frame = +2
Query: 200 WKKLGLPVLVKEFGAIDYLDFSPVEPYYFAA-TCSVRVQVYD----PVTKVVAKNISKFV 364
W+ P L A++ L +SP E F++ +C +++D T + N V
Sbjct: 280 WQTDSSPFL-SHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGV 338
Query: 365 EAAYGGCFRADGRLLVAGSEEAAVKLFDVQS-KNVLRV------FTGHTGPVHRTFFTKD 523
+ LL G++ ++D++S K+ V F H P++ + +
Sbjct: 339 DVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPN 398
Query: 524 QLKIISY-SDDKSVGLWDISTE 586
+ +I D + LWD+S E
Sbjct: 399 EDSVIGVVGADNQISLWDLSVE 420
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +2
Query: 395 DGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 574
D R AG++ V +FD ++ + + H G + ++ D + ++ S S +WD
Sbjct: 201 DERFASAGAD-GKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWD 259
Query: 575 IST 583
+T
Sbjct: 260 ANT 262
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 386 FRADGRLLVAGSEEAAVKLFDVQSKNVLRV-FTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
+ DG+ L G V L+D S+ V+ + HTG + + + + S D ++
Sbjct: 487 YSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHLATASLDTNI 546
Query: 563 GLWDI 577
++ +
Sbjct: 547 HIYSV 551
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 497 VHRTFFTKDQLKIISYSDDKSVGLWD 574
+ + F+KD ++ + S+DK + LWD
Sbjct: 65 IRQVAFSKDYSRMATVSEDKCLRLWD 90
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 482 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
GH G F+ D + S S+D+++ LW I +
Sbjct: 192 GHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIES 225
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 242 AIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNI--SKFVE 367
AID +D S + +Y + ++R Q+Y V + +I S+F++
Sbjct: 411 AIDPIDASDISDHYLFSRRTIRKQLYSSVDSNIISSIWQSEFIK 454
>SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 281
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 3 LFNVGFVFTYFANVFMED 56
+F +GFVFTY A ++D
Sbjct: 100 IFGLGFVFTYLAEQIVQD 117
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +2
Query: 416 GSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 583
G V L+ S L H GPV +D +++ D + +WD+ T
Sbjct: 241 GHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRT 296
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 419 SEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 571
S + +KL+ + + + GHT V+ + +Q I S +D+++ +W
Sbjct: 193 SNDGVIKLWTSDGEFLYELH-GHTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 473 VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 580
+F GH+ V T F K+ + + S D ++ WD++
Sbjct: 84 MFPGHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLN 119
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 275 PYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADG 400
PY F + S + + Y + K+ K I+ VEA+ G C G
Sbjct: 998 PYGFQKSTSDKCR-YAVLQKLSVKRIADMVEASIGACLLDSG 1038
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/66 (19%), Positives = 32/66 (48%)
Frame = +2
Query: 383 CFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 562
C+ D +L+V+ ++++ +++ + L+ H V F + SDD+++
Sbjct: 141 CWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYFATESDDRTI 200
Query: 563 GLWDIS 580
+W +S
Sbjct: 201 KVWRVS 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,292,365
Number of Sequences: 5004
Number of extensions: 44800
Number of successful extensions: 273
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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