Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17l19
(669 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1057 + 27248249-27249001 155 3e-38
03_02_0380 - 7945959-7946699 152 2e-37
02_01_0529 - 3846489-3847268 152 3e-37
09_04_0535 + 18397051-18397644 136 1e-32
08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150 127 9e-30
08_02_1128 + 24510735-24511055 108 3e-24
04_04_1632 - 34926955-34927332 87 9e-18
01_05_0464 - 22470963-22472291 82 4e-16
01_01_0018 + 139150-140415 80 2e-15
01_03_0204 + 13771346-13772680 77 2e-14
10_02_0162 + 6054823-6055830 68 8e-12
05_03_0410 + 13616708-13617691 64 1e-10
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 58 6e-09
05_05_0328 + 24130887-24130919,24132207-24132279,24133542-241336... 57 1e-08
01_01_0592 + 4414416-4415132 52 3e-07
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 34 0.089
07_03_0791 + 21539069-21539257,21539493-21539711 33 0.27
12_02_0605 - 20924385-20924606,20924705-20924899 31 0.63
12_02_0151 - 14468480-14468698,14468902-14469090 31 0.63
07_03_0790 + 21536389-21536577,21536854-21537072 31 0.63
03_05_0949 + 29089293-29089487,29089592-29089810 31 0.63
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 30 1.5
10_08_0010 - 14078740-14079270 29 3.3
03_02_0562 - 9469263-9469517,9469619-9469843 29 4.4
03_06_0599 + 34984869-34985319,34986581-34987563 28 5.9
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 28 7.7
05_05_0119 - 22512228-22512500,22512577-22512795 28 7.7
>06_03_1057 + 27248249-27249001
Length = 250
Score = 155 bits (376), Expect = 3e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
LQQFW + L DI++ DFK +LPLARIKKIMK DE+V+MISAEAPV+FAKA EIFI
Sbjct: 80 LQQFWAERLVDIEQTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFIL 137
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
ELTLR+W HTEENKRRTLQ+NDIA AI ++D +DFL+DIVPR ++K
Sbjct: 138 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLK 183
>03_02_0380 - 7945959-7946699
Length = 246
Score = 152 bits (369), Expect = 2e-37
Identities = 70/106 (66%), Positives = 85/106 (80%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
LQ FW ++ ++ ++ DFK LPLARIKKIMK DE+V+MISAEAPVLFAKA E+FI
Sbjct: 46 LQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFIL 105
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
ELT+R+W H EENKRRTLQRND+A AI ++D FDFL+DIVPR E K
Sbjct: 106 ELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAK 151
>02_01_0529 - 3846489-3847268
Length = 259
Score = 152 bits (368), Expect = 3e-37
Identities = 71/106 (66%), Positives = 89/106 (83%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
L++FW +E+I++ DFK +LPLARIKKIMK DE+V+MISAEAPV+FAKA E+FI
Sbjct: 84 LREFWANQMEEIEQTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFIL 141
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
ELTLR+W HTEENKRRTLQ+NDIA AI ++D +DFL+DIVPR E+K
Sbjct: 142 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMK 187
>09_04_0535 + 18397051-18397644
Length = 197
Score = 136 bits (330), Expect = 1e-32
Identities = 65/106 (61%), Positives = 82/106 (77%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
LQ FW + +I+ DFK LPLARIKKIMK DE+V+MI+AEAPV+FA+A E+FI
Sbjct: 60 LQMFWAEQYREIEATT--DFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFIL 117
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
ELT R W+H EENKRRTLQ++DIA AI +++ FDFL+DIVPR + K
Sbjct: 118 ELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDDAK 163
>08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150
Length = 276
Score = 127 bits (306), Expect = 9e-30
Identities = 59/106 (55%), Positives = 80/106 (75%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
LQ FW + +++++ +FK LPLARIKKIMK DE+VKMI+ EAP LFAKA E+FI
Sbjct: 106 LQAFWADQMAEVEQMT--EFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFIL 163
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
++TLR+W HTEE +RRTLQR+D+ I K+D FDFL+DI+ ++K
Sbjct: 164 DMTLRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMK 209
>08_02_1128 + 24510735-24511055
Length = 106
Score = 108 bits (260), Expect = 3e-24
Identities = 49/73 (67%), Positives = 62/73 (84%)
Frame = +3
Query: 432 MKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIATAILKSDQF 611
MK DE+V+MI+AEAPV+FA+A E+FI ELT R W+H EENKRRTLQ++DIA AI +++ F
Sbjct: 1 MKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVF 60
Query: 612 DFLIDIVPRHEVK 650
DFL+DIVPR E K
Sbjct: 61 DFLVDIVPRDEAK 73
>04_04_1632 - 34926955-34927332
Length = 125
Score = 87.4 bits (207), Expect = 9e-18
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 14/91 (15%)
Frame = +3
Query: 402 ALPLARIKKIMKL---DEEV-----------KMISAEAPVLFAKAAEIFIHELTLRAWSH 539
ALPLARIKKIMK D V +MIS EAPV+F+KA E+FI ELT RAW+
Sbjct: 23 ALPLARIKKIMKRSAGDSSVVDGGGGGGGGARMISGEAPVVFSKACELFIAELTRRAWAA 82
Query: 540 TEENKRRTLQRNDIATAILKSDQFDFLIDIV 632
T E KRRT+ + D+A A+ +D FDFL+D+V
Sbjct: 83 TLEGKRRTVHKEDVAAAVQNTDLFDFLVDVV 113
>01_05_0464 - 22470963-22472291
Length = 442
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/106 (33%), Positives = 64/106 (60%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
+ +FW ++I+ ++DF A+P+AR+KKI+ + M++ + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIE--TTKDFSEHAIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQ 79
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
EL +RAW+ + + R + DIA AI ++ +DFL+DI+ H VK
Sbjct: 80 ELAVRAWASAQSHNRCIILDTDIAKAIASTESYDFLVDILHNHRVK 125
>01_01_0018 + 139150-140415
Length = 421
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/106 (33%), Positives = 62/106 (58%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
+ +FW ++I+ ++DF A+P+AR+KKI + M+S + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIE--TTKDFSEHAIPMARLKKIASSQKGNMMMSFDMPAFLSKMCELFVQ 79
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
EL +RAW+ + + R + DIA AI ++ +DFL+DI+ H K
Sbjct: 80 ELAVRAWASAQSHNRCIILDTDIAEAIASTESYDFLVDILHNHREK 125
>01_03_0204 + 13771346-13772680
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/106 (32%), Positives = 62/106 (58%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
+ +FW ++I+ ++DF +P+AR+KKI+ + M++ + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIEM--TKDFSEHMIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQ 79
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHEVK 650
EL RAW+ + + R + DIA A+ ++ +DFL+DI+ H VK
Sbjct: 80 ELAARAWACAQSHNRCIILDMDIAEAVASTESYDFLVDILHNHSVK 125
>10_02_0162 + 6054823-6055830
Length = 335
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/104 (32%), Positives = 56/104 (53%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
+++FW E I++ S + LP++R+K I+ E M+SA+ P K E+F+
Sbjct: 31 MEKFWRMSQEQIEE--SAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQ 88
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHE 644
EL LRAW + R + DIA AI ++ + FL ++V H+
Sbjct: 89 ELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQ 132
>05_03_0410 + 13616708-13617691
Length = 327
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 333 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 512
+++FW + E I+ S LP+ +K +++ + M+SA+ P K E+F+
Sbjct: 31 MEEFWRRSQEQIEA--SAGNHEHILPIDCVKNVIRPKNDAMMLSADTPTFVTKLCELFVQ 88
Query: 513 ELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDFLIDIVPRHE 644
ELTLRAW + R + DIA AI ++ + FL +++ H+
Sbjct: 89 ELTLRAWVCANSHNRDIILGTDIAEAITTTESYHFLGNVLRSHK 132
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P ARIKKIM+ DE+V I+ PVL ++A E+F+ +L R + T ++ +TL +
Sbjct: 10 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRTYEITLQSGAKTLNSFHLKQ 69
Query: 588 AILKSDQFDFLIDIV 632
+ + FDFL ++V
Sbjct: 70 CVRRYSSFDFLTEVV 84
>05_05_0328 +
24130887-24130919,24132207-24132279,24133542-24133635,
24133924-24134037,24134121-24134169,24134364-24134873
Length = 290
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P RIKKIM+ DE+V I+ PVL +KA E+F+ +L R + T + +TL + +
Sbjct: 10 PAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCNRTYDITVQRGVKTLSSSHLKQ 69
Query: 588 AILKSDQFDFLIDIVPR 638
I + +DFL D+V +
Sbjct: 70 CIHSYNVYDFLRDVVSK 86
>01_01_0592 + 4414416-4415132
Length = 238
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Frame = +3
Query: 348 DKVLEDIQKVNSE----DFKTQ--ALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFI 509
D+ E +++V E D Q ALPL R+K+I+++D ++K ++ EA +L A A E+F+
Sbjct: 94 DEATEPMEQVEGEGEDGDAAAQRPALPLGRVKRIIRVDRDIKKVTNEAALLIAAATELFV 153
Query: 510 HELTLRAWSHTEENKRRTLQRNDI-ATAILKSDQFDFLIDIVPRHE 644
L A RR ++ + A A DFL+D +P E
Sbjct: 154 GSLAAGAHRAASRRGRRAVRAVHVRAAAREHRPTADFLLDCLPAAE 199
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 34.3 bits (75), Expect = 0.089
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 387 DFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTL 566
D + P+AR+++IM+ ++ S EA L KA EIF+ A+ + +++++++
Sbjct: 200 DHGAGSFPMARVRQIMRAEDATIRPSNEAVFLINKATEIFLKRFADDAYRNALKDRKKSI 259
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + + + A APV A E E+ A + +NK+ + I
Sbjct: 28 PVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQL 87
Query: 588 AILKSDQFDFLIDIV 632
A+ ++ L+ V
Sbjct: 88 AVRNDEELSRLLGTV 102
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + + + A APV + E E+ A + +NK+ + I
Sbjct: 30 PVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQL 89
Query: 588 AILKSDQFDFLIDIV 632
A+ ++ L+ V
Sbjct: 90 AVRNDEELSRLLGAV 104
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + + + A APV A E E+ A + +NK+ + I
Sbjct: 28 PVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQL 87
Query: 588 AILKSDQFDFLI 623
A+ ++ L+
Sbjct: 88 AVRNDEELTKLL 99
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + + + A APV A E E+ A + +NK+ + I
Sbjct: 28 PVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQL 87
Query: 588 AILKSDQFDFLI 623
A+ ++ L+
Sbjct: 88 AVRNDEELTKLL 99
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + + + A APV + E E+ A + +NK+ + I
Sbjct: 30 PVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQL 89
Query: 588 AILKSDQFDFLIDIV 632
A+ ++ L+ V
Sbjct: 90 AVRNDEELSRLLGTV 104
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 497 RDFYTRANVASLVAYGGK*KADSAAQRHSDSYIEIGSVRFPDRHSAA 637
R YT A A+ VA GG + D+AA + + + ++ FP H+AA
Sbjct: 287 RQMYTAAAAAAAVAAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 333
>10_08_0010 - 14078740-14079270
Length = 176
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 348 PRTAGGFAAPPQRRTP-HRLHQ-HPLLRTWSP 259
P A A PPQRR P HRL++ HP R P
Sbjct: 55 PAMAAAAAQPPQRRLPAHRLYRSHPHFRHRQP 86
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + I APV A E E+ A + +NK+ + +
Sbjct: 40 PVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLL 99
Query: 588 AILKSDQFDFLI 623
AI ++ L+
Sbjct: 100 AIRNDEELGKLL 111
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 360 LRLCPRTAGGFAAPPQRRTPHRLHQHPLLRTWSPSLFVRQAQ 235
LR PR AG AAP Q R + H ++R +P LF Q
Sbjct: 131 LRHPPRAAGAAAAPGQARPSALIATHQIIR--APGLFGNSQQ 170
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 510 HELTLRAWSHTEENKRRTLQRNDIATAILKSDQFD 614
HEL +WS +E + +T RN+ I SD ++
Sbjct: 2916 HELVQYSWSDVQERRSQTEYRNEEILDIFVSDLYE 2950
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +3
Query: 408 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 587
P+ RI + +K + I APV A E E+ A + +NK+ + +
Sbjct: 38 PVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLL 97
Query: 588 AILKSDQFDFLI 623
AI ++ L+
Sbjct: 98 AIRNDEELGKLL 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,099
Number of Sequences: 37544
Number of extensions: 298234
Number of successful extensions: 854
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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