Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17l16
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533504-1|CAG38535.1| 323|Homo sapiens DKFZP566A1524 protein. 111 3e-24
BC038971-1|AAH38971.1| 323|Homo sapiens family with sequence si... 111 3e-24
AL136704-1|CAB66639.1| 323|Homo sapiens hypothetical protein pr... 111 3e-24
AC104623-1|AAY24282.1| 323|Homo sapiens unknown protein. 111 3e-24
BC017297-1|AAH17297.1| 324|Homo sapiens family with sequence si... 109 8e-24
BC016345-1|AAH16345.1| 324|Homo sapiens FAM49B protein protein. 109 8e-24
BC003599-1|AAH03599.1| 324|Homo sapiens FAM49B protein protein. 109 8e-24
AY598320-1|AAT06731.1| 324|Homo sapiens L1 protein. 109 8e-24
AK002059-1|BAA92062.1| 324|Homo sapiens protein ( Homo sapiens ... 109 8e-24
>CR533504-1|CAG38535.1| 323|Homo sapiens DKFZP566A1524 protein.
Length = 323
Score = 111 bits (266), Expect = 3e-24
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+R+ + P + FLDFENA PT ER++++ + VL +SE IL ++Q Y
Sbjct: 1 MGNLLKVLTREIENY---PHF--FLDFENAQPTEGEREIWNQISAVLQDSESILADLQAY 55
Query: 416 KGAGKEIREAIADPSRIS-QERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
KGAG EIR+AI +P+ I QE+AW AV PLV +L Y S++L++ + LL SL
Sbjct: 56 KGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPY 115
Query: 593 SPTQHLEQQ 619
+PTQHLE++
Sbjct: 116 TPTQHLERE 124
>BC038971-1|AAH38971.1| 323|Homo sapiens family with sequence
similarity 49, member A protein.
Length = 323
Score = 111 bits (266), Expect = 3e-24
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+R+ + P + FLDFENA PT ER++++ + VL +SE IL ++Q Y
Sbjct: 1 MGNLLKVLTREIENY---PHF--FLDFENAQPTEGEREIWNQISAVLQDSESILADLQAY 55
Query: 416 KGAGKEIREAIADPSRIS-QERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
KGAG EIR+AI +P+ I QE+AW AV PLV +L Y S++L++ + LL SL
Sbjct: 56 KGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPY 115
Query: 593 SPTQHLEQQ 619
+PTQHLE++
Sbjct: 116 TPTQHLERE 124
>AL136704-1|CAB66639.1| 323|Homo sapiens hypothetical protein
protein.
Length = 323
Score = 111 bits (266), Expect = 3e-24
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+R+ + P + FLDFENA PT ER++++ + VL +SE IL ++Q Y
Sbjct: 1 MGNLLKVLTREIENY---PHF--FLDFENAQPTEGEREIWNQISAVLQDSESILADLQAY 55
Query: 416 KGAGKEIREAIADPSRIS-QERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
KGAG EIR+AI +P+ I QE+AW AV PLV +L Y S++L++ + LL SL
Sbjct: 56 KGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPY 115
Query: 593 SPTQHLEQQ 619
+PTQHLE++
Sbjct: 116 TPTQHLERE 124
>AC104623-1|AAY24282.1| 323|Homo sapiens unknown protein.
Length = 323
Score = 111 bits (266), Expect = 3e-24
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+R+ + P + FLDFENA PT ER++++ + VL +SE IL ++Q Y
Sbjct: 1 MGNLLKVLTREIENY---PHF--FLDFENAQPTEGEREIWNQISAVLQDSESILADLQAY 55
Query: 416 KGAGKEIREAIADPSRIS-QERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
KGAG EIR+AI +P+ I QE+AW AV PLV +L Y S++L++ + LL SL
Sbjct: 56 KGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPY 115
Query: 593 SPTQHLEQQ 619
+PTQHLE++
Sbjct: 116 TPTQHLERE 124
>BC017297-1|AAH17297.1| 324|Homo sapiens family with sequence
similarity 49, member B protein.
Length = 324
Score = 109 bits (262), Expect = 8e-24
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+ + P + FLDFENA PT +E+++Y+ V VL ++E ILE++Q Y
Sbjct: 1 MGNLLKVLTCTDLE--QGPNF--FLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSY 56
Query: 416 KGAGKEIREAIADPS-RISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
+GAG EIREAI P+ QE+AW AV PLV KL Y S +L+ + LLG+L
Sbjct: 57 RGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPY 116
Query: 593 SPTQHLEQQ 619
SPTQHLE++
Sbjct: 117 SPTQHLERE 125
>BC016345-1|AAH16345.1| 324|Homo sapiens FAM49B protein protein.
Length = 324
Score = 109 bits (262), Expect = 8e-24
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+ + P + FLDFENA PT +E+++Y+ V VL ++E ILE++Q Y
Sbjct: 1 MGNLLKVLTCTDLE--QGPNF--FLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSY 56
Query: 416 KGAGKEIREAIADPS-RISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
+GAG EIREAI P+ QE+AW AV PLV KL Y S +L+ + LLG+L
Sbjct: 57 RGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPY 116
Query: 593 SPTQHLEQQ 619
SPTQHLE++
Sbjct: 117 SPTQHLERE 125
>BC003599-1|AAH03599.1| 324|Homo sapiens FAM49B protein protein.
Length = 324
Score = 109 bits (262), Expect = 8e-24
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+ + P + FLDFENA PT +E+++Y+ V VL ++E ILE++Q Y
Sbjct: 1 MGNLLKVLTCTDLE--QGPNF--FLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSY 56
Query: 416 KGAGKEIREAIADPS-RISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
+GAG EIREAI P+ QE+AW AV PLV KL Y S +L+ + LLG+L
Sbjct: 57 RGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPY 116
Query: 593 SPTQHLEQQ 619
SPTQHLE++
Sbjct: 117 SPTQHLERE 125
>AY598320-1|AAT06731.1| 324|Homo sapiens L1 protein.
Length = 324
Score = 109 bits (262), Expect = 8e-24
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+ + P + FLDFENA PT +E+++Y+ V VL ++E ILE++Q Y
Sbjct: 1 MGNLLKVLTCTDLE--QGPNF--FLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSY 56
Query: 416 KGAGKEIREAIADPS-RISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
+GAG EIREAI P+ QE+AW AV PLV KL Y S +L+ + LLG+L
Sbjct: 57 RGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPY 116
Query: 593 SPTQHLEQQ 619
SPTQHLE++
Sbjct: 117 SPTQHLERE 125
>AK002059-1|BAA92062.1| 324|Homo sapiens protein ( Homo sapiens
cDNA FLJ11197 fis, clone PLACE1007690. ).
Length = 324
Score = 109 bits (262), Expect = 8e-24
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +2
Query: 236 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 415
MG LL +L+ + P + FLDFENA PT +E+++Y+ V VL ++E ILE++Q Y
Sbjct: 1 MGNLLKVLTCTDLE--QGPNF--FLDFENAQPTESEKEIYNQVNVVLKDAEGILEDLQSY 56
Query: 416 KGAGKEIREAIADPS-RISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAM 592
+GAG EIREAI P+ QE+AW AV PLV KL Y S +L+ + LLG+L
Sbjct: 57 RGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPY 116
Query: 593 SPTQHLEQQ 619
SPTQHLE++
Sbjct: 117 SPTQHLERE 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,501,623
Number of Sequences: 237096
Number of extensions: 1961073
Number of successful extensions: 3888
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3879
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -