Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17l11
(177 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 1.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 1.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 1.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 1.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 4.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 4.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 4.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 4.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 4.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 19 4.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 19 4.2
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 19 5.5
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 19 5.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 7.3
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 19 7.3
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 19 7.3
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 18 9.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 18 9.6
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N K++NN+ N L+Y +
Sbjct: 310 NYKNYNNNYNSKKLYYNI 327
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N K++NN+ N L+Y +
Sbjct: 321 NYKNYNNNYNSKKLYYNI 338
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 1.8
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N+ +N + NC L+Y +
Sbjct: 94 NNYKYNYNNNCKKLYYNI 111
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 1.8
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 31 MHKNFNTKFADRCPNDFIVINSKSWNNH--ENCSALFYPV 144
+H N N K+ N N+ ++NN+ NC L+Y +
Sbjct: 323 IHNNNNYKYNYNNNN----YNNNNYNNNYNNNCKKLYYNI 358
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N+ ++NN NC L+Y +
Sbjct: 101 NNNNYNN--NCKKLYYNI 116
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N+ ++NN NC L+Y +
Sbjct: 101 NNNNYNN--NCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N+ ++NN NC L+Y +
Sbjct: 101 NNNNYNN--NCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 91 NSKSWNNHENCSALFYPV 144
N+ ++NN NC L+Y +
Sbjct: 101 NNNNYNN--NCKKLYYNI 116
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 120 LFCPILPCVLIKFV 161
+F ILPC+LI V
Sbjct: 217 VFNLILPCILINSV 230
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 19.4 bits (38), Expect = 4.2
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 100 SWNNHENCSAL 132
SW N+++CS +
Sbjct: 115 SWANYKDCSGI 125
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.4 bits (38), Expect = 4.2
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 100 SWNNHENCSAL 132
SW N+++CS +
Sbjct: 115 SWANYKDCSGI 125
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 100 SWNNHENCSAL 132
SW ++NCS +
Sbjct: 112 SWAKNQNCSGI 122
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 100 SWNNHENCSAL 132
+W +ENCS +
Sbjct: 109 TWAKNENCSGI 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 18.6 bits (36), Expect = 7.3
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -3
Query: 124 NNFHDYSNF*N 92
NN+++Y+N+ N
Sbjct: 332 NNYNNYNNYNN 342
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +1
Query: 64 RCPNDFIVINSKSWNNHENC 123
RC + V SK W +C
Sbjct: 56 RCSSYLQVSGSKIWQMERSC 75
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 18.6 bits (36), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 86 TIKSLGHRSANFVLKFL 36
T KSL HR ++ +LK L
Sbjct: 53 THKSLQHRGSSGMLKRL 69
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 19 EYIEMHKNFNTKFADRCPNDFIVINSKSWNN 111
+YI N ++ + + +I+ N W+N
Sbjct: 322 KYIREIMNKESRISAAIDSGYILNNDGKWHN 352
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +1
Query: 19 EYIEMHKNFNTKFADRCPNDFIVINSKSWNN 111
+YI N ++ + + +I+ N W+N
Sbjct: 322 KYIREIMNKESRISAAIDSGYILNNDGKWHN 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,917
Number of Sequences: 438
Number of extensions: 692
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -