Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17k22
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 120 1e-27
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 48 8e-06
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 48 8e-06
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 37 0.014
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 32 0.41
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.71
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 31 0.94
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 31 0.94
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 31 0.94
U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 2.9
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z79639-2|CAB01915.1| 367|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 5.0
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 28 6.6
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 28 6.6
AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical... 27 8.7
AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc fi... 27 8.7
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 120 bits (288), Expect = 1e-27
Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Frame = +1
Query: 127 ESLGRALIKDRFSKNRNKKHVEDNTMLHTTEVNDGYDWGRLN--LQSVTAESSLQEFLST 300
+SLG +L DR K R K H + E N + +N + SVT E+SL+EFL+
Sbjct: 16 KSLGNSLSNDR-EKTR-KSHQRAKYDGNDIE-NPAFMEHEVNHYIDSVTDETSLEEFLAK 72
Query: 301 AELAQREFTAEKLNLKYVKS-----VPSEV---AIVTSQPDFDEPLTVPRRPQWNPGVTA 456
AELA EFTAEK K ++ VP+ + A + Q + + L +PRRP
Sbjct: 73 AELAGTEFTAEKEQFKIIEKNSAIVVPTRLDYRANLDLQKENEHRLRIPRRPAKELWENM 132
Query: 457 EEQLNRERETFLDWRRHLNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLILLDARN 636
E+ E E FL WR L+ELQ G +TP+ERN ++W++LWR +EKSDI++ ++DARN
Sbjct: 133 EDLTKLENEAFLQWRSDLSELQEVDGLVLTPFERNPDMWRELWRVVEKSDIIVQIVDARN 192
Query: 637 PLLF 648
PLLF
Sbjct: 193 PLLF 196
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 47.6 bits (108), Expect = 8e-06
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +1
Query: 568 LWKQLWRTLEKSDIVLILLDARNPLLF 648
+W++LWR +EKSDI++ ++DARNPLLF
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLF 27
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 47.6 bits (108), Expect = 8e-06
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +1
Query: 568 LWKQLWRTLEKSDIVLILLDARNPLLF 648
+W++LWR +EKSDI++ ++DARNPLLF
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLF 27
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 36.7 bits (81), Expect = 0.014
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Frame = +1
Query: 100 VKIMGKKNKESLGRA--LIKDRFSKNRNKKH--VEDNTMLHTTEVNDGYDWGRLNLQSVT 267
VK + KK ES + L K++ + + +KH + +L N ++ L Q
Sbjct: 194 VKALNKKMTESAVKIEKLNKEKMAVEQREKHEQAQRQQLLQKVAQNQAHE-SELARQIQG 252
Query: 268 AESSL----QEFLSTAELAQREFTAEKLNLKYVKSVPSEVA--IVTSQPDFDEPLTVPRR 429
E L QE ++ + + EK LK ++S S + + T + + + L ++
Sbjct: 253 IEGKLRVKEQELVAAGKAVKNNEEHEK-ELKLLRSTNSSFSTELKTIRKEHEAQLQ-KKQ 310
Query: 430 PQWNPGVTAEEQLNRERETFLDWRRHLNELQAKLGAAVTPYERNLELWKQLW 585
+W EQL +E+E + + H + KL AAV E LE + W
Sbjct: 311 EEWKK---LHEQLEQEKEKLISEKEHAKQTHLKLAAAVENVEAELEKQGKEW 359
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 208 HTTEVNDGYDWGRLNLQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVKSVPSEVAIV- 384
++TEV +GR +++V+ E +L +F T + + +T E N K + VP V I+
Sbjct: 1110 YSTEVKGEMKFGRYTVKTVSVEENLDQF--TDKQTAKVYTIEFHNNKVLMKVPFPVKILA 1167
Query: 385 -TSQPDFDEP 411
+ PD P
Sbjct: 1168 FSGWPDHGAP 1177
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.71
Identities = 28/95 (29%), Positives = 41/95 (43%)
Frame = -1
Query: 494 SKNVSLSRLSCSSAVTPGFHWGLRGTVRGSSKSGCDVTMATSLGTDFTYFRLSFSAVNSL 315
S +S S S +PG TVRGS+ SG VT ++ G+ + S+ SL
Sbjct: 1197 SPAISTSTQQSVSTNSPGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTS----GSSSATSL 1252
Query: 314 CASSAVERNSWSEDSAVTDWRFKRPQSYPSFTSVV 210
+SS V S S + + + P S + VV
Sbjct: 1253 SSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVV 1287
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 30.7 bits (66), Expect = 0.94
Identities = 9/25 (36%), Positives = 21/25 (84%)
Frame = +1
Query: 568 LWKQLWRTLEKSDIVLILLDARNPL 642
+W +L++ ++ SD+V+ ++DAR+P+
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPM 245
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 30.7 bits (66), Expect = 0.94
Identities = 9/25 (36%), Positives = 21/25 (84%)
Frame = +1
Query: 568 LWKQLWRTLEKSDIVLILLDARNPL 642
+W +L++ ++ SD+V+ ++DAR+P+
Sbjct: 162 VWGELYKVIDSSDVVVQVVDARDPM 186
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 30.7 bits (66), Expect = 0.94
Identities = 9/25 (36%), Positives = 21/25 (84%)
Frame = +1
Query: 568 LWKQLWRTLEKSDIVLILLDARNPL 642
+W +L++ ++ SD+V+ ++DAR+P+
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPM 245
>U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical
protein F46G11.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 364 PSEVAIVTSQPDFDEPL-TVPRRPQWNPGVTAEEQLNRER 480
PS VTS PDFDEP P++P + ++ NR+R
Sbjct: 175 PSTEPPVTSIPDFDEPTDDEPQKPMMDDPAQLQDDDNRKR 214
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 2.9
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Frame = +1
Query: 163 SKNRNKKHVEDNTMLHTTEVNDGYDWGRLNLQSVTAE-SSLQEFLSTAELAQREFTAEKL 339
SK+R+++ T+ + R + A L+ +S A+ A ++ K
Sbjct: 952 SKHRDQQEQLQLTLDELKSAQHSTETSRSQSNELAARIEELEASISFAQKALQDVEDVKH 1011
Query: 340 NLKYVKSVPSEVAIVTSQPDFDEPLTVPRRPQWNPGVTAE-EQLNRERETFLDWRRHLNE 516
S +E A+V + DF+ T + ++N V+A+ EQL + + +
Sbjct: 1012 QQDIQISEANE-AMVKLKQDFETERTSLQN-EFNQTVSADKEQLGHAEQMIAQKEKEIIT 1069
Query: 517 LQAKLGAAVTPYERNLELWKQLWRT 591
LQA++ A +E LE +W+T
Sbjct: 1070 LQARIEAMSQQFEERLEA-SNVWKT 1093
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 325 TAEKLNLKYVKSVP-SEVAIVTSQPDFDEPLTVPRRPQWNPGVTAEEQLNRE-RETFLDW 498
T K K SVP +EV P +VP + ++ E QL +E RE DW
Sbjct: 623 TQNKNKKKNKISVPKTEVWSSLGPPPDSAVASVPVETWQDIPLSKEAQLEKEKRERKEDW 682
Query: 499 RRHLNELQAKLGAA 540
R E+QA++ AA
Sbjct: 683 ARKKAEIQARVAAA 696
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 451 TAEEQLNRERETFLDWRRHLNELQAKLGAAVTPYERNLELWKQLWRTLEKSD 606
T EE NR E+ +L +A++ AA+ + +E W++ TLE+ D
Sbjct: 286 TEEEWTNRINESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQD 337
>Z79639-2|CAB01915.1| 367|Caenorhabditis elegans Hypothetical
protein F54E4.2 protein.
Length = 367
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -1
Query: 242 PQSYPSFTSVVWSMVLSSTCFLLRFLENLSLMRALPRDSLFFLPIILTYTTKQGEIQLPL 63
P Y + W MV+ CF++ + N+ L+ A+ +++ + II Y+T + + +
Sbjct: 128 PIHYTTLWRSPWHMVIP--CFIVAIISNMYLLVAVKQENFQCILIIDEYSTLYNSVDVFI 185
Query: 62 TFLI 51
+ L+
Sbjct: 186 STLL 189
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 169 NRNKKHVEDNTMLHTTEVNDGYDWGRLNLQSVTAES 276
N N+K+ DNT + +D +DW R +L + S
Sbjct: 2607 NINQKNYGDNTFMSIQHADDFWDWARESLATALLAS 2642
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 169 NRNKKHVEDNTMLHTTEVNDGYDWGRLNLQSVTAES 276
N N+K+ DNT + +D +DW R +L + S
Sbjct: 2607 NINQKNYGDNTFMSIQHADDFWDWARESLATALLAS 2642
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -2
Query: 631 LHLTISIQYQIFLKSSITASKVPSFSHKVSLLHQA*LEV 515
+HL I + + F S+T+SKVP +++ +L++ L++
Sbjct: 1 MHLLIFVLFYFFNSYSVTSSKVPVCTNEFTLINNKCLKL 39
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 255 EIQTSPIISIIHLCSVEHGIVFDMFFVAIFRESIFDEGSP---KRLFILLAHYLNLH 94
+I+ SP+ +++H + E VFD S+F EG P +++ + L HY + H
Sbjct: 193 KIEDSPMATLLHQVNFEEHGVFDF-------TSVFVEGRPLNEEKIHLFLDHYKSAH 242
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 255 EIQTSPIISIIHLCSVEHGIVFDMFFVAIFRESIFDEGSP---KRLFILLAHYLNLH 94
+I+ SP+ +++H + E VFD S+F EG P +++ + L HY + H
Sbjct: 193 KIEDSPMATLLHQVNFEEHGVFDF-------TSVFVEGRPLNEEKIHLFLDHYKSAH 242
>AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical
protein Y66D12A.22 protein.
Length = 86
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 168 FRESIFDEGSPKRLFILLAHYLNLHYKTGRNTTSFN 61
FRES +G L +A YL++H K G+ TS +
Sbjct: 38 FRESELTKGEAVCLDRCVAKYLDVHEKLGKRLTSMS 73
>AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 86
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 168 FRESIFDEGSPKRLFILLAHYLNLHYKTGRNTTSFN 61
FRES +G L +A YL++H K G+ TS +
Sbjct: 38 FRESELTKGEAVCLDRCVAKYLDVHEKLGKRLTSMS 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,974,357
Number of Sequences: 27780
Number of extensions: 310643
Number of successful extensions: 932
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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