Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17k08
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 100 2e-21
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 93 5e-19
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 75 1e-13
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 50 4e-06
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 36 0.056
AY058686-1|AAL13915.1| 547|Drosophila melanogaster LD40728p pro... 36 0.056
AE014134-1900|AAF52961.2| 547|Drosophila melanogaster CG6187-PA... 36 0.056
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 35 0.13
L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related ... 31 1.2
AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p pro... 31 1.2
AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-P... 31 1.2
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 31 2.1
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 30 2.8
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 30 3.7
AE014296-3533|AAS65088.1| 1094|Drosophila melanogaster CG33288-P... 30 3.7
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 30 3.7
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 29 6.5
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 29 6.5
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 29 6.5
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 29 6.5
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 29 6.5
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 29 6.5
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 29 6.5
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 29 8.6
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 100 bits (240), Expect = 2e-21
Identities = 46/128 (35%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Frame = -1
Query: 371 QHVDALSRN---ILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 201
+HVD LSR+ + + EL AR+KK+Q +D+S++ I +IL++ ++ Y L+ G++Y +
Sbjct: 590 RHVDFLSRHPQACMMITSELTARIKKSQQNDDSIRAILEILKDRLFQPYKLKGGLLYSMV 649
Query: 200 E--KKLVLPKILDMEIIKKAHRTGHFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLL 27
+ LV+P +++ E+I+ AH GH +K I++ +FI L+ K++K+IS C+ C++
Sbjct: 650 NGNELLVVPALMEREVIQSAHEVGHLSLQKTMHSIQQQFFIPHLEYKVKKLISNCIKCII 709
Query: 26 ASRKSGKK 3
S+K GK+
Sbjct: 710 HSKKLGKQ 717
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 92.7 bits (220), Expect = 5e-19
Identities = 44/129 (34%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Frame = -1
Query: 371 QHVDALSRN---ILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 201
+HVD LSR+ + + EL AR+KK+Q +D+S++ I +IL++ ++ Y L+ G++Y +
Sbjct: 896 RHVDFLSRHPQACMMITSELTARIKKSQQNDDSIRAILEILKDRLFQPYKLKGGLLYSMV 955
Query: 200 --EKKLVLPKILDMEIIKKAHRTGHFGKKKIRDIIEKDYFITKL-DSKIEKVISTCVPCL 30
+ LV+P +++ E+I+ AH GH +K I++ +F + + K++K+IS C+ C+
Sbjct: 956 NGNELLVVPALMEREVIQSAHEVGHLSLQKTMHSIQQQFFYFLIWEYKVKKLISNCIKCI 1015
Query: 29 LASRKSGKK 3
+ S+K GK+
Sbjct: 1016 IHSKKLGKQ 1024
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 74.5 bits (175), Expect = 1e-13
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Frame = -1
Query: 371 QHVDALSR--NILFVDVE-LHARVKKAQADDESLKVIRKILEENEYEDYFLENGVIYKGI 201
QHVDALSR NI+ + + Q D LK IR++LE E + Y + NG++YK
Sbjct: 1125 QHVDALSRCTNIMVIQTNSFEDNLVICQGKDTKLKEIRQLLENTENKLYEMRNGIVYKKT 1184
Query: 200 EKKLVL---PKILDMEIIKKAHRT-GHFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPC 33
+ +L P ++ +++ K H GH G+ K+ + I K+Y+ L K IS C+ C
Sbjct: 1185 NENRLLFYVPIEMEEQVLYKYHNELGHVGRDKMIEAIMKNYWFPNLKQKCSTHISNCLKC 1244
Query: 32 LLASRKSGK 6
+ S K+GK
Sbjct: 1245 ISFSPKTGK 1253
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 49.6 bits (113), Expect = 4e-06
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Frame = -1
Query: 293 DDESLKVIRKI----LEENEYEDYFLENGVIYKGIEKK------LVLPKILDMEIIKKAH 144
D E ++++ K+ L EN + Y L GV+Y+ ++++ V+P+ +I + H
Sbjct: 896 DLEIIEIVNKLESDELAENLAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKWSVINQVH 955
Query: 143 RT-GHFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLASRKSGK 6
+ H G +K D + + Y+ K++ + K +S C+ C SGK
Sbjct: 956 ESIMHLGWQKTLDKVYQYYWFAKMNKYVRKFVSNCITCRSVKSSSGK 1002
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 35.9 bits (79), Expect = 0.056
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -1
Query: 230 LENGVIYKGIEKKLVLPKI-LDMEIIKKAHR-TGHFGKKKIRDIIEKDYFITKLDSKIEK 57
L+N ++ ++L K L +IK AH+ T H G +R+ I++ Y+I L + ++K
Sbjct: 1363 LQNSNAEFNVKHPIILEKCHLTSLLIKNAHKETLHGGINLMRNYIQRKYWIFGLKNSLKK 1422
Query: 56 VISTCVPC 33
+ CV C
Sbjct: 1423 YLRECVTC 1430
>AY058686-1|AAL13915.1| 547|Drosophila melanogaster LD40728p
protein.
Length = 547
Score = 35.9 bits (79), Expect = 0.056
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 437 KDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKIL 258
KD P + ++I+EE+ Q + LS + VKK + + SLK R
Sbjct: 58 KDGSPAESKDPPISISEEKSETQSKEVLSEKRKASSTDDEGHVKKVKLEANSLKTKRPGF 117
Query: 257 EENEYED--YFLENGV 216
+ Y++ Y+ ENG+
Sbjct: 118 SDERYDETSYYFENGL 133
>AE014134-1900|AAF52961.2| 547|Drosophila melanogaster CG6187-PA
protein.
Length = 547
Score = 35.9 bits (79), Expect = 0.056
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 437 KDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKIL 258
KD P + ++I+EE+ Q + LS + VKK + + SLK R
Sbjct: 58 KDGSPAESKDPPISISEEKSETQSKEVLSEKRKASSTDDEGHVKKVKLEANSLKTKRPGF 117
Query: 257 EENEYED--YFLENGV 216
+ Y++ Y+ ENG+
Sbjct: 118 SDERYDETSYYFENGL 133
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 164 EIIKKAHRTGHFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLL 27
EII+K HR H G +IR + + Y+ ++ S I S+C C L
Sbjct: 695 EIIEKEHRRAHRGPTEIRLQLLEKYYFPRMSSTIRLQTSSCQCCKL 740
>L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related
protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = -1
Query: 446 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 267
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 266 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 123
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p
protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = -1
Query: 446 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 267
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 266 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 123
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-PA
protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = -1
Query: 446 IVLKDDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIR 267
I KD + S R + ITE Q+ Q + + ILF + ++ K AD + +
Sbjct: 81 IFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVA 140
Query: 266 KILEENEYEDYFLENGVIYKGIEKKLVLPKILDMEIIKKAHRTGHFGK 123
E E L +I G V+P +L +++ R GK
Sbjct: 141 DSEERTTMES--LNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -1
Query: 176 ILDMEIIKKAHRTG-HFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLASRK 15
+L + K HRT H G + + +I Y+I ++ + ++ V+++C C++ R+
Sbjct: 1342 LLSRLLAKFTHRTTLHGGNQLMVRLIRSKYWIPRIKNLMKAVVNSCKVCVIHKRR 1396
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 395 ITEEQLVKQ-HVDALSRNILFVDVELHARVKKAQADDESLKVIRKILEEN 249
+ EEQL KQ H D RNIL V L A ++ D ES V+R + + N
Sbjct: 2136 LCEEQLTKQVHYDFGLRNILSVLRTLGAAKRRNSKDTESTIVMRVLRDMN 2185
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/74 (24%), Positives = 43/74 (58%)
Frame = -1
Query: 434 DDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKILE 255
++VPV + P +A EE+L+++ + + ++ + E +VKKA+ ++++ +E
Sbjct: 5830 EEVPVEEVPEDVA-PEEELIEEQEEIVDQDEI---QEQKRKVKKAKKPKKTIEKTEIEIE 5885
Query: 254 ENEYEDYFLENGVI 213
E++ E+ L+ +I
Sbjct: 5886 EDQPEEEVLQEEII 5899
>AE014296-3533|AAS65088.1| 1094|Drosophila melanogaster CG33288-PB
protein.
Length = 1094
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 350 RNILFVDVELHARVKKAQADDESLKVIRKILEENEYEDYFLEN 222
RNI D + AQ D + +IRK E++DY +N
Sbjct: 126 RNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKN 168
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/74 (24%), Positives = 43/74 (58%)
Frame = -1
Query: 434 DDVPVSQRPRRLAITEEQLVKQHVDALSRNILFVDVELHARVKKAQADDESLKVIRKILE 255
++VPV + P +A EE+L+++ + + ++ + E +VKKA+ ++++ +E
Sbjct: 5830 EEVPVEEVPEDVA-PEEELIEEQEEIVDQDEI---QEQKRKVKKAKKPKKTIEKTEIEIE 5885
Query: 254 ENEYEDYFLENGVI 213
E++ E+ L+ +I
Sbjct: 5886 EDQPEEEVLQEEII 5899
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 719 IEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 766
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 714 IEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 761
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 749 VEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 796
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 749 VEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 796
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 714 IEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 761
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 714 IEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 761
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 167 MEIIKKAHRTGH-FGKKKIRDIIEKDYFITKLDSKIEKVISTCVPCLLA 24
+EI+ H H ++ I+ ++ +DY+ K+ S ++V++ C C A
Sbjct: 1167 IEIVTAEHNRAHRAAQENIKQVL-RDYYFPKMGSLAKEVVANCRVCTQA 1214
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -1
Query: 164 EIIKKAH----RTGHFGKKKIRDIIEKDYFITKLDSKIEKVISTCVPC 33
EI+ K H GH G + + I++ Y+ ++ I K + TC+ C
Sbjct: 653 EILTKFHDDPIEGGHTGISRTQSKIKRFYYWPQMTKTISKYVKTCLKC 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,739,659
Number of Sequences: 53049
Number of extensions: 595706
Number of successful extensions: 1337
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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