Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17j18
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein.                   29   3.7  
BC035585-1|AAH35585.1| 1627|Homo sapiens Similar to triple funct...    29   3.7  
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.         29   3.7  
BC050468-1|AAH50468.2|  661|Homo sapiens ZNF714 protein protein.       28   6.4  
BC014887-1|AAH14887.2|  805|Homo sapiens WDR59 protein protein.        28   6.4  
AL834415-1|CAD39077.1|  644|Homo sapiens hypothetical protein pr...    28   6.4  
AB067510-1|BAB67816.1|  832|Homo sapiens KIAA1923 protein protein.     28   6.4  
U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.                    27   8.5  
BC098418-1|AAH98418.1|  293|Homo sapiens KIF6 protein protein.         27   8.5  

>U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein.
          Length = 2861

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -3

Query: 151 MVDQLHGAQEN-NQLWHFRALKL 86
           M+D+LH  +++ +Q+WH R LKL
Sbjct: 255 MLDRLHSTRQHLHQMWHVRKLKL 277


>BC035585-1|AAH35585.1| 1627|Homo sapiens Similar to triple
           functional domain (PTPRF interacting) protein.
          Length = 1627

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -3

Query: 151 MVDQLHGAQEN-NQLWHFRALKL 86
           M+D+LH  +++ +Q+WH R LKL
Sbjct: 255 MLDRLHSTRQHLHQMWHVRKLKL 277


>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
          Length = 3038

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -3

Query: 151 MVDQLHGAQEN-NQLWHFRALKL 86
           M+D+LH  +++ +Q+WH R LKL
Sbjct: 255 MLDRLHSTRQHLHQMWHVRKLKL 277


>BC050468-1|AAH50468.2|  661|Homo sapiens ZNF714 protein protein.
          Length = 661

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/69 (28%), Positives = 26/69 (37%)
 Frame = -2

Query: 218 CDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYIAAAECCKELLYIR 39
           CD     DP  RR         NG P  WS   Q    +   E + +  +   KE L  R
Sbjct: 27  CDLQVLRDPQLRRQVPRKP--RNGRPEVWSVSSQGSKWIPGAERKLLVYSYFEKETLTFR 84

Query: 38  DLVKEITNE 12
           D+  E + E
Sbjct: 85  DVAIEFSLE 93


>BC014887-1|AAH14887.2|  805|Homo sapiens WDR59 protein protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 16  FVISFTRSLIYSSSLQHSAAAIYSASVLESATTDCFLELHAIGPPFIQITKPEVLRLVSG 195
           +++ FTR +    ++  +     S S L +  T        I P  I+   P  LRL SG
Sbjct: 380 YLVYFTRPMTMHRAVSPTEPTPRSLSALSAYHTGL------IAPMKIRTEAPGNLRLYSG 433

Query: 196 SPAKSESQK 222
           SP +SE ++
Sbjct: 434 SPTRSEKEQ 442


>AL834415-1|CAD39077.1|  644|Homo sapiens hypothetical protein
           protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/69 (28%), Positives = 26/69 (37%)
 Frame = -2

Query: 218 CDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYIAAAECCKELLYIR 39
           CD     DP  RR         NG P  WS   Q    +   E + +  +   KE L  R
Sbjct: 41  CDLQVLRDPQLRRQVPRKP--RNGRPEVWSVSSQGSKWIPGAERKLLVYSYFEKETLTFR 98

Query: 38  DLVKEITNE 12
           D+  E + E
Sbjct: 99  DVAIEFSLE 107


>AB067510-1|BAB67816.1|  832|Homo sapiens KIAA1923 protein protein.
          Length = 832

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 16  FVISFTRSLIYSSSLQHSAAAIYSASVLESATTDCFLELHAIGPPFIQITKPEVLRLVSG 195
           +++ FTR +    ++  +     S S L +  T        I P  I+   P  LRL SG
Sbjct: 407 YLVYFTRPMTMHRAVSPTEPTPRSLSALSAYHTGL------IAPMKIRTEAPGNLRLYSG 460

Query: 196 SPAKSESQK 222
           SP +SE ++
Sbjct: 461 SPTRSEKEQ 469


>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
          Length = 1663

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -3

Query: 151 MVDQLHGAQEN-NQLWHFRALKL 86
           ++D+LH  +++ +Q+WH R LKL
Sbjct: 284 LLDKLHSTRQHLHQMWHVRKLKL 306


>BC098418-1|AAH98418.1|  293|Homo sapiens KIF6 protein protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 44  YIAVPYSILQQQYTQLQCSKVPQLIV 121
           +I    SILQ+QY QL CS  P+  V
Sbjct: 249 FIKARQSILQKQYLQLLCSLFPKSAV 274


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.128    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,374,411
Number of Sequences: 237096
Number of extensions: 717608
Number of successful extensions: 1689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)