Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17j08
(282 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 110 1e-25
05_04_0174 - 18728199-18731411 78 1e-15
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 74 1e-14
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 73 3e-14
06_02_0263 - 13566621-13569875 67 2e-12
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 66 4e-12
02_02_0572 + 11667455-11670783,11672026-11672419 66 5e-12
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 65 7e-12
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 65 7e-12
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 64 1e-11
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 60 3e-10
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 57 2e-09
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 56 3e-09
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 52 5e-08
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 52 9e-08
11_04_0454 - 17895935-17896093,17896878-17896911,17897114-178972... 51 1e-07
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 30 0.24
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 30 0.32
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 29 0.42
07_03_1670 - 28505732-28506426,28508202-28509309 29 0.73
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 28 0.97
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 28 0.97
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 1.3
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 28 1.3
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 28 1.3
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 1.7
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373... 27 2.2
06_01_0332 - 2398683-2399316,2399933-2399983,2400455-2400528,240... 27 2.2
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 27 2.2
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 27 3.0
04_04_1319 - 32615923-32615979,32616431-32616495,32616654-326167... 27 3.0
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 27 3.0
09_03_0057 + 11944973-11947159 26 3.9
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 26 5.2
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 26 5.2
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 26 5.2
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 26 5.2
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 26 5.2
02_01_0085 + 610872-611297 26 5.2
07_01_0786 + 6122144-6123187 25 6.8
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 25 6.8
02_04_0638 - 24654003-24654119,24655231-24655392 25 6.8
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 25 6.8
11_02_0007 + 7283080-7283918,7284526-7285764,7286317-7286376,728... 25 9.0
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316... 25 9.0
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 25 9.0
01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,979... 25 9.0
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 110 bits (265), Expect = 1e-25
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = +1
Query: 4 ATNTPGLNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTT 183
A P +N++TG P+S RY E+L KR LPVW+ K+DF+ +L +Q ++LVGETGSGKTT
Sbjct: 37 AAANPSINRWTGRPYSARYLEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTT 96
Query: 184 QIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMS 282
QIPQ+ +E GL VACTQPRRVAAMS
Sbjct: 97 QIPQFVLE---AEGLSNRSMVACTQPRRVAAMS 126
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 77.8 bits (183), Expect = 1e-15
Identities = 38/69 (55%), Positives = 53/69 (76%)
Frame = +1
Query: 76 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 255
+R LPV++ K+D ++ ++ H+ +++VGETGSGKTTQIPQ+ E +G G+ K VACT
Sbjct: 400 ERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAG-GRKK-VACT 457
Query: 256 QPRRVAAMS 282
QPRRVAAMS
Sbjct: 458 QPRRVAAMS 466
>04_03_0985 -
21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 74.1 bits (174), Expect = 1e-14
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +1
Query: 58 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
Y ++L R LP+ +K+ F++LL + IV+ GETG GKTTQ+PQ+ ++ S LG
Sbjct: 579 YLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELGGY 638
Query: 238 KGVACTQPRRVAAMS 282
+ CTQPRR+AA+S
Sbjct: 639 CSIVCTQPRRIAAIS 653
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 73.3 bits (172), Expect = 3e-14
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = +1
Query: 76 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 255
+R LP+++++++ ++ + +Q IV+VGETGSGKTTQIPQ+ E A + GK VACT
Sbjct: 413 ERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHE-AGYTAKGK---VACT 468
Query: 256 QPRRVAAMS 282
QPRRVAAMS
Sbjct: 469 QPRRVAAMS 477
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +1
Query: 67 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
+L +R LP++ KN+ + + +Q +V++GETGSGKTTQ+ Q+ E ++ GK +
Sbjct: 424 ILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYIT-RGK---I 479
Query: 247 ACTQPRRVAAMS 282
ACTQPRRVAA S
Sbjct: 480 ACTQPRRVAAES 491
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 64 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 243
++L R LP ++ K + + +Q IV+ GETG GKTTQ+PQ+ +E SG G
Sbjct: 255 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 314
Query: 244 VACTQPRRVAAMS 282
+ CTQPRR++AM+
Sbjct: 315 IICTQPRRISAMA 327
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 65.7 bits (153), Expect = 5e-12
Identities = 32/69 (46%), Positives = 49/69 (71%)
Frame = +1
Query: 76 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 255
+R LP+++ K + ++ ++ +Q +V++GETGSGKTTQ+ Q+ E A + GK + CT
Sbjct: 583 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE-AGYTTRGK---IGCT 638
Query: 256 QPRRVAAMS 282
QPRRVAAMS
Sbjct: 639 QPRRVAAMS 647
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 65.3 bits (152), Expect = 7e-12
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1
Query: 46 HSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 225
H E R + GLP++ Y+ + + + +Q ++L+GETGSGK+TQ+ V++ A SG
Sbjct: 249 HMIMLRECRRLKEGLPIYAYRRNILDHIFANQVMILIGETGSGKSTQL----VQYLADSG 304
Query: 226 LGKAKGVACTQPRRVAAMS 282
L + CTQPR++AA+S
Sbjct: 305 LAANGSIVCTQPRKIAAIS 323
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 65.3 bits (152), Expect = 7e-12
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1
Query: 64 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 243
++++ R LP+ YK+ L HQ +++ GETG GKTTQ+PQ+ ++ + G G++
Sbjct: 271 KIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDH--MWGKGESCK 328
Query: 244 VACTQPRRVAAMS 282
+ CTQPRR++A+S
Sbjct: 329 IVCTQPRRISAIS 341
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 64.5 bits (150), Expect = 1e-11
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +1
Query: 58 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
Y L R+R LPV++Y+ + L+ H ++VGETGSGK+TQIPQ+ E G
Sbjct: 41 YASLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEG---G 97
Query: 238 KGVACTQPRRVA 273
+ + CTQPRR+A
Sbjct: 98 RLIGCTQPRRLA 109
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 60.1 bits (139), Expect = 3e-10
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +1
Query: 88 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
LP ++ + +F++ + +Q +V+ GETG GKTTQ+PQ+ +E + G + CTQPRR
Sbjct: 1141 LPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADCSIICTQPRR 1200
Query: 268 VAAMS 282
++A+S
Sbjct: 1201 ISAIS 1205
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 56.8 bits (131), Expect = 2e-09
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 55 RYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFA-AVSGLG 231
R HE+ + R LP+ + + M + + ++L GETG GKTTQ+PQ+ E S
Sbjct: 229 RPHEVEKTRRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRS 288
Query: 232 KAKG-VACTQPRRVAAMS 282
KG + TQPRRVA ++
Sbjct: 289 DRKGIIGITQPRRVAVLA 306
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 56.4 bits (130), Expect = 3e-09
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 46 HSQRYHELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 222
H+ R +L+R+ R LP+ + + + + +++VGETGSGKTTQ+PQ+ + A
Sbjct: 16 HNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYD-AGFC 74
Query: 223 GLGKAKGVACTQPRRVAAMS 282
GK G+ TQPRRVAA++
Sbjct: 75 QDGKVIGI--TQPRRVAAVT 92
>07_03_0539 -
19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 52.4 bits (120), Expect = 5e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 121 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMS 282
+++ +Q +V+VGETGSGKTTQ+ Q+ E G V CTQPRRVAAMS
Sbjct: 631 KVVRENQVVVVVGETGSGKTTQLTQYLHE----DGYTTTGIVGCTQPRRVAAMS 680
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 51.6 bits (118), Expect = 9e-08
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +1
Query: 88 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
LP+ E++++ M + + +V++GETGSGK+TQ+ Q G + +A TQPRR
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQ----ILHRRGYTRRGAIAVTQPRR 70
Query: 268 VAAMS 282
VAA+S
Sbjct: 71 VAAVS 75
>11_04_0454 -
17895935-17896093,17896878-17896911,17897114-17897252,
17897487-17897561,17897666-17897945
Length = 228
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 70 LRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGK 177
L KR LPVW+ K+DF+ +L+ +Q ++LVGETGSGK
Sbjct: 56 LEKRRTLPVWQLKDDFLAVLHDNQALILVGETGSGK 91
>01_06_0555 -
30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 30.3 bits (65), Expect = 0.24
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 112 DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
DF + Q + LVG +GSGK+T I + A G K GV
Sbjct: 384 DFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATEGTVKVDGV 428
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 29.9 bits (64), Expect = 0.32
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 82 LGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV-SGLGKAKG 243
+GL V+ Y F R++ T + L+G TGSG WS +F A S LG G
Sbjct: 782 VGLHVFRY---FERVMATESAVRLIGGTGSG------NWSKDFGAFDSSLGSLSG 827
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 29.5 bits (63), Expect = 0.42
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 55 RYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
RY + + R G + + F N Q IV++GE G+GKTT I
Sbjct: 354 RYPTMTKTRCGFKLSVTEGSF----NDSQIIVMLGENGTGKTTFI 394
>07_03_1670 - 28505732-28506426,28508202-28509309
Length = 600
Score = 28.7 bits (61), Expect = 0.73
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 73 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQ 195
R R G P W +D RL V+V + GSGK T + +
Sbjct: 243 RVRRGFPSWVSASDRRRLQQQVAADVVVAKDGSGKFTTVSE 283
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQI 189
+DF + + + I LVGE+GSGK+T I
Sbjct: 957 SDFTLHIPSQKTIALVGESGSGKSTII 983
>01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 28.3 bits (60), Expect = 0.97
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQI 189
H + LVGE+GSGK+T I
Sbjct: 1067 HNTVALVGESGSGKSTAI 1084
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQI 189
N F + + + + LVGE+GSGK+T I
Sbjct: 400 NGFSLQIPSGRTMALVGESGSGKSTVI 426
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 266 RLG*VQATPLALPRPLTAANSTDHWGIWVVFPDPVSPTSTIH 141
R G + P+A P+ + + D W +FP PV+P +H
Sbjct: 1510 RGGLINVGPVA-PQMSRSGSDADRWQQKGIFPSPVTPMQVMH 1550
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQI 189
+DF + + + + LVGE+GSGK+T I
Sbjct: 1050 SDFTLHIPSGKTVALVGESGSGKSTAI 1076
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 91 PVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
P E D +++ + + LVGE+GSGK+T I
Sbjct: 1054 PDVEIFRDLCLTIHSGKTVALVGESGSGKSTAI 1086
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 121 RLLNTHQCIVLVGETGSGKTT 183
R + + ++LVGETG GKTT
Sbjct: 1222 RCYRSREPVLLVGETGGGKTT 1242
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 145 IVLVGETGSGKTTQI 189
++LVGETG+GKTT +
Sbjct: 520 VLLVGETGTGKTTLV 534
>07_03_0902 -
22435692-22436156,22436684-22436923,22437228-22437349,
22437441-22437587,22437753-22437882,22437981-22438116,
22438223-22438428,22438644-22438844,22438999-22439157,
22439781-22439858,22440453-22440542,22440625-22440777,
22440873-22440991,22441190-22441328,22441422-22441525,
22441944-22441989,22442087-22442252,22442356-22442383,
22442460-22442610,22442686-22442829,22442912-22443013,
22443566-22444093
Length = 1217
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
MR +Q I++ GE+G+GK T+ + ++++ A LG A+G+
Sbjct: 306 MRRDGVNQSIIISGESGAGK-TETAKIAMQYLAT--LGDARGM 345
>06_01_0332 -
2398683-2399316,2399933-2399983,2400455-2400528,
2400685-2400782,2400874-2400956,2401323-2401582
Length = 399
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 224 PLTAANSTDHWGIWVVFPDPVSPTSTIHW*VLSNLMKSFLYSQ 96
P++AA D G W P P S T+T LS L++S ++ +
Sbjct: 283 PISAAADDDVAGCWRPLPSPSSSTTT----ALSLLLRSSMFQE 321
>05_07_0004 + 26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQI 189
+DF + + + + LVG++GSGK+T I
Sbjct: 989 SDFTLSIPSGKTVALVGQSGSGKSTAI 1015
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 112 DFMRLLNTHQCIVLVGETGSGKTTQI 189
D + + + + LVGE+GSGK+T I
Sbjct: 1050 DLCLTIQSGKTVALVGESGSGKSTAI 1075
>04_04_1319 -
32615923-32615979,32616431-32616495,32616654-32616732,
32616817-32616946,32617478-32617550,32617634-32617688,
32617800-32617846,32619232-32619421
Length = 231
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 112 DFMRLLNTHQCIVLVGETGSGKTT 183
D + LN +CI LVG GSGKTT
Sbjct: 84 DVVPYLND-RCIYLVGMMGSGKTT 106
>01_06_0365 + 28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 112 DFMRLLNTHQCIVLVGETGSGKTTQI 189
DF + + + + LVGE+GSGK+T I
Sbjct: 931 DFTLGIPSGKTVALVGESGSGKSTVI 956
>09_03_0057 + 11944973-11947159
Length = 728
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQIPQ 195
+D +L++ H+C ++ GET T+IPQ
Sbjct: 562 HDMAQLISEHECFIVKGET---DLTKIPQ 587
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
Q +V++GE G+GKTT I
Sbjct: 374 QIVVMLGENGTGKTTFI 390
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 52 QRYHELLRKRLGLPVWEYK 108
+R+H+ +++R GLP W K
Sbjct: 113 ERHHDTIKRRKGLPRWTEK 131
>04_04_1183 -
31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 145 IVLVGETGSGKTTQIPQWSVEFAAVSG 225
+ +VG TG GKT+ I E VSG
Sbjct: 647 VAIVGSTGEGKTSLISAMLGEIPPVSG 673
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 258
Q I++ GE+G+GKT A + G +A+G + Q
Sbjct: 150 QAILVSGESGAGKTESTKMLMQYLAFMGGKAQAEGRSVQQ 189
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 22 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTT 183
LN Y +P + L+ RL L +D LVG +G+GKTT
Sbjct: 555 LNYYVDMPSEMKQQGLMESRLQL-----LSDISGAFRPGLLTALVGVSGAGKTT 603
>02_01_0085 + 610872-611297
Length = 141
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 66 AITKTFRTP---SLGIQK*FHEITQHSPMYSARRRNRVREDYPDPPVVC 203
A+T+ TP + G ++ H P ARRR+ PDPP C
Sbjct: 50 AVTRARSTPDSCAWGAERRPHAPPPRLPPVVARRRSARSRAAPDPPTSC 98
>07_01_0786 + 6122144-6123187
Length = 347
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEF 210
H+ +V++G TG+GKT +++F
Sbjct: 52 HKAVVVMGATGTGKTRLAVDLALQF 76
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
Frame = +1
Query: 142 CIVLVGETGSGKT-------TQIPQWSVEFAAVSGL 228
CI G+TGSGKT T W V + A++ L
Sbjct: 533 CIFAYGQTGSGKTYTMSGPSTSKQDWGVNYRALNDL 568
>02_04_0638 - 24654003-24654119,24655231-24655392
Length = 92
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 187 IPQWSVEFAAVSGLGKA 237
+PQ+SVE A+VSGL A
Sbjct: 1 MPQYSVEIASVSGLDPA 17
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
Frame = +1
Query: 142 CIVLVGETGSGKT-------TQIPQWSVEFAAVSGL 228
CI G+TGSGKT T W V + A++ L
Sbjct: 551 CIFAYGQTGSGKTYTMSGPGTSREDWGVNYRALNDL 586
>11_02_0007 +
7283080-7283918,7284526-7285764,7286317-7286376,
7287469-7287610
Length = 759
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQ 195
H+ + VG GSGKTT + Q
Sbjct: 197 HRVVSAVGSGGSGKTTLVKQ 216
>09_05_0006 -
20030673-20030895,20031432-20031478,20031597-20031665,
20032590-20032725,20032900-20033067,20034286-20034354,
20034535-20034631,20034742-20034820,20035702-20035872
Length = 352
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 82 LGLPVWEYKNDFMRLLNTHQCIVL-VGETGSGKTT 183
LG+P +KN F R+ + + L + ET +G++T
Sbjct: 211 LGVPALSWKNGFQRMASLMESWPLKLAETAAGQST 245
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 77 FRNSSW*RCECGRPVYLFSP 18
FR+ SW CGR ++LF P
Sbjct: 197 FRSYSWSANVCGRKLWLFLP 216
>01_01_1214 -
9793854-9794003,9795418-9795456,9795604-9795702,
9795779-9795907,9796473-9796619,9797513-9797643,
9798497-9798716,9798858-9798951,9799021-9799133,
9799799-9799903,9800008-9800112,9800762-9800849,
9800933-9801054,9801130-9801189,9802313-9802408,
9802506-9802658,9802752-9802838,9803995-9804062,
9804429-9804552,9805057-9805152,9805250-9805359,
9805459-9805573,9806877-9806942,9807260-9807420,
9807927-9808167
Length = 972
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 34 TGLPHSQRYHELLRKRLGLPVWEYKNDFMR 123
TG+ H+QRY L ++RLG + + +F R
Sbjct: 524 TGV-HAQRYRVLSKQRLGRAILIFVQNFRR 552
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,985,928
Number of Sequences: 37544
Number of extensions: 156265
Number of successful extensions: 627
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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