Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17j08
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 113 2e-26
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 113 2e-26
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 72 7e-14
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 72 7e-14
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 71 1e-13
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 71 1e-13
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 71 1e-13
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 63 3e-11
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 63 3e-11
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 58 1e-09
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 58 1e-09
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 53 4e-08
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 53 4e-08
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 48 1e-06
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 30 0.29
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 30 0.29
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 0.51
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 0.90
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 0.90
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 0.90
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 0.90
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 1.2
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 28 1.2
AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein. 28 1.2
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 2.1
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 2.1
U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical pr... 27 2.1
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 2.1
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 26 3.6
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 26 3.6
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 26 3.6
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 26 3.6
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 26 3.6
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 26 3.6
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 26 4.8
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 25 6.3
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 25 6.3
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 6.3
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 25 6.3
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 25 6.3
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 25 6.3
M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 25 6.3
M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 25 6.3
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 25 6.3
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 25 8.4
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 25 8.4
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 25 8.4
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 25 8.4
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 25 8.4
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 25 8.4
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 25 8.4
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 25 8.4
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 25 8.4
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 113 bits (271), Expect = 2e-26
Identities = 56/91 (61%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = +1
Query: 22 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 201
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 202 VEFAAVSGLGKAKG----VACTQPRRVAAMS 282
VEF G+ G VACTQPRRVAAMS
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMS 144
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 113 bits (271), Expect = 2e-26
Identities = 56/91 (61%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = +1
Query: 22 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 201
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 202 VEFAAVSGLGKAKG----VACTQPRRVAAMS 282
VEF G+ G VACTQPRRVAAMS
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMS 144
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 71.7 bits (168), Expect = 7e-14
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 67 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 247 ACTQPRRVAAMS 282
CTQPRRVAAMS
Sbjct: 589 GCTQPRRVAAMS 600
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 71.7 bits (168), Expect = 7e-14
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 67 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 247 ACTQPRRVAAMS 282
CTQPRRVAAMS
Sbjct: 589 GCTQPRRVAAMS 600
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 4 ATNTPGLNKYTGLPHSQRYHELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 180
A PG N+ +++ + + R LPV+ +++ F+ + HQ +++ GETGSGKT
Sbjct: 335 ALQMPGTNEEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKT 394
Query: 181 TQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMS 282
TQ+PQ+ E G K + CTQPRRVAAMS
Sbjct: 395 TQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMS 425
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 4 ATNTPGLNKYTGLPHSQRYHELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 180
A PG N+ +++ + + R LPV+ +++ F+ + HQ +++ GETGSGKT
Sbjct: 335 ALQMPGTNEEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKT 394
Query: 181 TQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMS 282
TQ+PQ+ E G K + CTQPRRVAAMS
Sbjct: 395 TQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMS 425
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 4 ATNTPGLNKYTGLPHSQRYHELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 180
A PG N+ +++ + + R LPV+ +++ F+ + HQ +++ GETGSGKT
Sbjct: 335 ALQMPGTNEEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKT 394
Query: 181 TQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMS 282
TQ+PQ+ E G K + CTQPRRVAAMS
Sbjct: 395 TQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMS 425
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 63.3 bits (147), Expect = 3e-11
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +1
Query: 73 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 252
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 253 TQPRRVAAMS 282
TQPRRVAAMS
Sbjct: 492 TQPRRVAAMS 501
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 63.3 bits (147), Expect = 3e-11
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +1
Query: 73 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 252
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 253 TQPRRVAAMS 282
TQPRRVAAMS
Sbjct: 492 TQPRRVAAMS 501
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 52 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 231
Q+ +L + + LP+ E + + LL T+Q +++ G+TG GK+TQ+PQ+ ++ +G
Sbjct: 80 QKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLK----AGF- 134
Query: 232 KAKGVACTQPRRVA 273
GVACTQPRR+A
Sbjct: 135 --TGVACTQPRRIA 146
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 57.6 bits (133), Expect = 1e-09
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +1
Query: 43 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 222
PH + +E R LP+ + M L + + ++++GETGSGK+TQ+PQ V +
Sbjct: 147 PHFEANYEKF-SRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVR----A 201
Query: 223 GLGKAKGVACTQPRRVAAMS 282
G+ + +A TQPRRVAA+S
Sbjct: 202 GIANSGSIAVTQPRRVAAIS 221
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 55.6 bits (128), Expect = 5e-09
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 52 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 231
+R E+ + R LP++ + + +N + V+ GETGSGKTTQIPQ+ E A + G
Sbjct: 224 ERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYE-AGYASEG 282
Query: 232 KAKGVACTQPRRVAAMS 282
+ G+ T+PRRVAA++
Sbjct: 283 ELIGI--TEPRRVAAIA 297
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 52.8 bits (121), Expect = 4e-08
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +1
Query: 43 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 222
P S+ EL + R LP +Y + ++ +++ +++ G TG GKTTQ+PQ+ ++ A +
Sbjct: 166 PKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHEN 225
Query: 223 GLGKAKGVACTQPRRVAAMS 282
K V TQPRR+AA+S
Sbjct: 226 --NKHVRVMVTQPRRIAAIS 243
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 52.8 bits (121), Expect = 4e-08
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 46 HSQRYHEL--LRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV 219
H+ Y L ++R+ LP+++ + + + ++ I++VGETG GK+TQ+PQ+ +E
Sbjct: 61 HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLE---A 117
Query: 220 SGLGKAKGVACTQPRRVAAMS 282
+ + TQPRRVA ++
Sbjct: 118 GWAADGRQIVITQPRRVAVVT 138
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/73 (30%), Positives = 45/73 (61%)
Frame = +1
Query: 64 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 243
++ +R LPV +Y+ + ++ + ++ ++ GETG GK+TQ+ Q+ +E + G +
Sbjct: 373 KITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFN 432
Query: 244 VACTQPRRVAAMS 282
+QPRR++A+S
Sbjct: 433 AVVSQPRRISAIS 445
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 103 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 234
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 91 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 132
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 103 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 234
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 29 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 70
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.1 bits (62), Expect = 0.51
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKT 180
M + +QC+V+ GE+GSGKT
Sbjct: 248 MLRIKENQCVVISGESGSGKT 268
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 161 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 212
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 0.90
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVA 273
++ +++VGETG GKTT + V G GK + + C + A
Sbjct: 1013 NEAVLMVGETGGGKTT--------LSEVVGRGKLRSINCHERTETA 1050
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 127 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 127 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 267
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKT 180
MR + T Q I++ GE+G+GKT
Sbjct: 145 MRRIKTSQSIIVSGESGAGKT 165
>AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 5 LPIHLD*INILVFRIHNVTMSYYENV*DSQSGNTKMIS*DYSTLTNV 145
L HL + L+ + T Y +NV S S NTK S D+S TNV
Sbjct: 576 LDAHLFVVKHLLI-LREQTAPYRQNVLRSDSLNTKDFSIDFSKFTNV 621
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
+CI LVG +GSGK+T I
Sbjct: 434 ECIALVGASGSGKSTVI 450
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
+CI LVG +GSGK+T +
Sbjct: 351 ECIALVGASGSGKSTVV 367
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
+CI LVG +GSGK+T +
Sbjct: 410 ECIALVGASGSGKSTVV 426
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
+CI LVG +GSGK+T +
Sbjct: 410 ECIALVGASGSGKSTVV 426
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 121 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVA 249
++ N + ++LVG +GSGKT W V A+ +GVA
Sbjct: 2151 QITNLNHGLMLVGSSGSGKTM---AWKVLLKALERWENVEGVA 2190
>U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical
protein F46G11.1 protein.
Length = 618
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 109 NDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVE 207
N ++ L + VL G TG+GKTT + ++S++
Sbjct: 315 NKYLGGLRPGEMTVLTGGTGNGKTTFLCEYSLD 347
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 121 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVA 249
++ N + ++LVG +GSGKT W V A+ +GVA
Sbjct: 2151 QITNLNHGLMLVGSSGSGKTM---AWKVLLKALERWENVEGVA 2190
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 139 QCIVLVGETGSGKTT 183
+CI LVG +GSGK+T
Sbjct: 409 ECIALVGASGSGKST 423
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 139 QCIVLVGETGSGKTT 183
+CI LVG +GSGK+T
Sbjct: 409 ECIALVGASGSGKST 423
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 85 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
GLPV KN + N Q + LVG +GSGK+T I
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLI 593
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKT 180
M+ CIV+ GE+G+GKT
Sbjct: 91 MKRFGRDSCIVISGESGAGKT 111
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKT 180
M+ CIV+ GE+G+GKT
Sbjct: 91 MKRFGRDSCIVISGESGAGKT 111
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
+ IV++GE G+GKTT I
Sbjct: 382 EIIVMLGENGTGKTTMI 398
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 85 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
GLPV KN + N Q + LVG +GSGK+T I
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLI 593
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 85 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
GLPV KN + N Q + LVG +GSGK+T I
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLI 593
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 85 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 189
GLPV KN + N Q + LVG +GSGK+T I
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLI 593
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +1
Query: 22 LNKYTGLP-HSQRYHELLRKRLGLPVWEY---KNDFMRLLN--THQCIVLVGETGSGKT 180
+N + +P +S +L + + LP Y +N F +L +Q I++ GE+G+GKT
Sbjct: 123 INPWRNIPIYSDEVKQLYQLQNDLPPHVYSVAQNAFHGILKGGRNQSILITGESGAGKT 181
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 WEYKN-DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGL 228
W YK+ DF L+T I LVG G+GK+T + + GL
Sbjct: 409 WIYKDIDFGIDLDTR--IALVGPNGAGKSTLLKLLCTDVMPTDGL 451
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 93 SLGIQK*FHEITQHSPMYSARRRNRVREDY 182
S+G Q F+EI QH P +S +N+ E++
Sbjct: 145 SVGDQDKFYEIVQH-PTWSGAEKNKKIEEF 173
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
+Q +++ GE+G+GKT + FA V KA
Sbjct: 170 NQSMLITGESGAGKTENTKKVICYFATVGASQKA 203
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
+Q +++ GE+G+GKT + FA V KA
Sbjct: 170 NQSMLITGESGAGKTENTKKVICYFATVGASQKA 203
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAV 219
+ +L H Q +++ GE+G+GKT + FAAV
Sbjct: 158 YRNMLQNHENQSMLITGESGAGKTENTKKVISYFAAV 194
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAV 219
+ +L H Q +++ GE+G+GKT + FAAV
Sbjct: 158 YRNMLQNHENQSMLITGESGAGKTENTKKVISYFAAV 194
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAV 219
+ +L H Q +++ GE+G+GKT + FAAV
Sbjct: 158 YRNMLQNHENQSMLITGESGAGKTENTKKVISYFAAV 194
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
+Q +++ GE+G+GKT + FA V KA
Sbjct: 170 NQSMLITGESGAGKTENTKKVICYFATVGASQKA 203
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 WEYKN-DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGL 228
W YK+ DF L+T I LVG G+GK+T + + GL
Sbjct: 408 WIYKDIDFGIDLDTR--IALVGPNGAGKSTLLKLLCTDVMPTDGL 450
>M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein.
Length = 260
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 115 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAV 219
+ +L H Q +++ GE+G+GKT + FAAV
Sbjct: 47 YRNMLQNHENQSMLITGESGAGKTENTKKVISYFAAV 83
>M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein.
Length = 251
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 237
+Q +++ GE+G+GKT + FA V KA
Sbjct: 56 NQSMLITGESGAGKTENTKKVICYFATVGASQKA 89
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 WEYKN-DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGL 228
W YK+ DF L+T I LVG G+GK+T + + GL
Sbjct: 409 WIYKDIDFGIDLDTR--IALVGPNGAGKSTLLKLLCTDVMPTDGL 451
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 243
+Q +++ GE+G+GKT + FA V A G
Sbjct: 172 NQSMLITGESGAGKTENTKKVISYFAIVGATQAASG 207
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical protein
F22E10.3 protein.
Length = 1327
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
Q + LVG +GSGK+T I
Sbjct: 1115 QTVALVGPSGSGKSTNI 1131
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 127 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
+N + + LVG +G GK+T I + +G+ K G+
Sbjct: 401 VNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGI 440
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 127 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
+N + + LVG +G GK+T I + +G+ K G+
Sbjct: 401 VNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGI 440
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 127 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 246
+N + + LVG +G GK+T I + +G+ K G+
Sbjct: 401 VNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGI 440
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 136 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 243
+Q +++ GE+G+GKT + FA V A G
Sbjct: 172 NQSMLITGESGAGKTENTKKVISYFAIVGATQAASG 207
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 118 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 225
MR +Q +++ GE+G+GKT A +SG
Sbjct: 142 MRREKKNQSVIISGESGAGKTESTKLVLQFLATISG 177
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 139 QCIVLVGETGSGKTTQI 189
Q + LVG +GSGK+T I
Sbjct: 1115 QTVALVGPSGSGKSTNI 1131
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 145 IVLVGETGSGKTTQI 189
++ VGETG+GKTT I
Sbjct: 102 LMCVGETGTGKTTLI 116
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 145 IVLVGETGSGKTTQI 189
++ VGETG+GKTT I
Sbjct: 102 LMCVGETGTGKTTLI 116
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 145 IVLVGETGSGKTTQI 189
++ VGETG+GKTT I
Sbjct: 171 LMCVGETGTGKTTLI 185
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 139 QCIVLVGETGSGKTT 183
QC VL+G G+GK+T
Sbjct: 626 QCTVLLGHNGAGKST 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,706,525
Number of Sequences: 27780
Number of extensions: 131692
Number of successful extensions: 513
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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