Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17j03
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000299-5|AAC47977.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.9
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 7.7
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 7.7
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 7.7
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 7.7
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 7.7
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 7.7
>AF000299-5|AAC47977.1| 335|Caenorhabditis elegans Hypothetical
protein E03H12.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 238 ILTLQARLRVDIVTRYSKFLYAYLHDLIYTTNW 140
I +Q++ D V + +KF+ Y D YTT W
Sbjct: 205 IAGMQSKKEFDYVLKTAKFITGYTPDYQYTTVW 237
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1034 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1075
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1005 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1046
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1139 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1180
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1034 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1075
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1005 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1046
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1139 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1180
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 719 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 760
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 179 ICVSSRLNIHHELVNVSAVHTKNPP-CRLMHASGSASMHRPTPGKKHDDREVLLSLSLNI 3
IC S + +I +L ++ V+T N P C L S +K DD + LL ++ N+
Sbjct: 633 ICASYKKSIDSKLEELANVYTDNDPRCLLEGIQNSVENFEVKIHQKVDDTKKLLHITENM 692
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 449 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 583
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,972,171
Number of Sequences: 27780
Number of extensions: 292675
Number of successful extensions: 774
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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