Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17i12
(161 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 26 0.58
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 26 0.58
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 1.3
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos... 23 4.1
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 23 4.1
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 23 5.4
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 23 7.2
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 23 7.2
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 23 7.2
SPMIT.08 |||mitochondrial ribosomal small subunit|Schizosaccharo... 22 9.5
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 22 9.5
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 26.2 bits (55), Expect = 0.58
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 115 KYILITIIHVFILQYFLYNLF 53
+Y+L+ II + L YF+YN F
Sbjct: 5 EYVLLVIILILSLCYFIYNNF 25
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 0.58
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 154 FTIKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIXSTI 32
F I LFY LF + + + TII +L F + I S I
Sbjct: 148 FVISLFYSLFHAHPFRINTIIPALVLPIFPCMICGVIASAI 188
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.0 bits (52), Expect = 1.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 139 FYILFIRNKYILITIIHVFILQYFLYNLFNYIXSTIHVD 23
F ++FI +YI I I V +L + LFN S + D
Sbjct: 1432 FKLVFIEMQYINIISIIVLVLTSLAWFLFNIFISEHYPD 1470
>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
Rec8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 561
Score = 23.4 bits (48), Expect = 4.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -2
Query: 154 FTIKLFYILFIRN-----KYILITIIHVFILQYFLYNLFNYIXSTIHVD 23
FT K F + I+N K +L+ FI + LY+ FN +HVD
Sbjct: 98 FTSKPFKNIDIQNEQTNPKQLLLAEDPAFIPEVSLYDAFNLPSVDLHVD 146
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 58 LFNYIXSTIHVDYTF 14
LFNY+ S IH D ++
Sbjct: 527 LFNYVLSLIHFDMSY 541
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 97 IIHVFILQYFLYNLFNYIXSTIHVDYTFSYF 5
+I + I ++Y F YI + IH + +F
Sbjct: 281 VISLIIAPLWIYFTFKYITTCIHANIDIVHF 311
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 160 FFFTIKLFYILFIRNKYILITIIHVFILQYFL 65
FF ++F + I N+Y + I F+L F+
Sbjct: 407 FFLDNRIFLLERIMNRYGIPMTIDTFLLMQFI 438
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 22.6 bits (46), Expect = 7.2
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +2
Query: 8 IAKRVIDVDCTXNVVKEVIQEV 73
+A +V+D+D T + ++ + QE+
Sbjct: 32 VALKVVDLDATKDQIETLTQEI 53
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 139 FYILFIRNKYILITIIHVFILQYFLY 62
F+ LFI + ++L ++H + + LY
Sbjct: 132 FHHLFIMDSFMLPLVLHHRFISFMLY 157
>SPMIT.08 |||mitochondrial ribosomal small
subunit|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 227
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 44 NVVKEVIQEVL*NKNMYNSY*YVFI 118
+++ +IQ+ L N +Y+S Y FI
Sbjct: 73 SIISNIIQKALSNHLLYSSKNYSFI 97
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 130 LFIRNKYILITIIHVFILQYFLYNLFNY 47
LF+R+++I + I IL+ YNL Y
Sbjct: 315 LFVRSRFIDVLAITTKILEIDPYNLDVY 342
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,652
Number of Sequences: 5004
Number of extensions: 6296
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 2,362,478
effective HSP length: 34
effective length of database: 2,192,342
effective search space used: 41654498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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