Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17i08
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 97 9e-21
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 73 2e-13
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 59 3e-09
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 58 8e-09
AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 41 0.001
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 41 0.001
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 39 0.003
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 38 0.007
Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical pr... 35 0.052
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 35 0.052
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 34 0.12
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 33 0.16
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 33 0.16
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 33 0.21
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 33 0.27
AF003146-3|AAB54203.2| 252|Caenorhabditis elegans Abc transport... 32 0.36
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 0.63
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 31 0.63
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 31 0.63
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 31 1.1
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 30 1.5
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 29 2.6
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 29 2.6
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 29 2.6
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 29 2.6
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 3.4
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 29 3.4
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 28 5.9
AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical ... 28 7.8
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 97.5 bits (232), Expect = 9e-21
Identities = 47/123 (38%), Positives = 72/123 (58%)
Frame = +3
Query: 12 VQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRV 191
++L++DPI+ ++D+PT L PL+ Y +I L A K+ II+T+ RSD+ L
Sbjct: 167 MELLKDPILTIIDDPTAYLSPLSAYQLIYALHFYAAKFNRIIIITLRNVRSDLSHLLGSA 226
Query: 192 VYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYLCLSTVDRRSRERFIESNHQIA 371
L G+V Y+G R L ++F GF CP ENP YYL L T+D+ S ++ +E+ +
Sbjct: 227 TCLFYGEVAYSGQMRLLPNHFKKAGFECPPNENPAAYYLSLLTIDKESMQKVMETQEKAT 286
Query: 372 ALV 380
LV
Sbjct: 287 KLV 289
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/128 (30%), Positives = 65/128 (50%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+ QL+RDP IL+ + D+D + +I L A K +I+ + +
Sbjct: 243 VASQLVRDPTILVCSDIFKDIDVHDQCFLIDYLREWAVKTNRIVIMAISPTSLQILNMFS 302
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYLCLSTVDRRSRERFIESNHQ 365
+ + L G ++Y GP +++ YF +IG PCP +N YY+ L T D + + ES+ +
Sbjct: 303 KAMILASGRMIYFGPPKSMQQYFETIGCPCPPYKNVCDYYVDLVTHDNLTSDASRESSVR 362
Query: 366 IAALVEKF 389
IA LV K+
Sbjct: 363 IARLVNKW 370
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/93 (36%), Positives = 52/93 (55%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
+L+ +P IL DEPT LD V+ +LSN AK G +I T+ +P S ++ DRV+
Sbjct: 187 ELLSNPSILFCDEPTTGLDSFMAESVVQVLSNLAKS-GRTVICTIHQPSSQLYLMFDRVM 245
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENP 293
++ G + G R+ + +F GF CP+ NP
Sbjct: 246 FMAGGKTAFLGSPRDAIQFFEDAGFACPRNFNP 278
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/122 (29%), Positives = 64/122 (52%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
+++ DP IL DEPT LD ++ VI L + G +I T+ +P + V+ D+++
Sbjct: 257 EILTDPPILFCDEPTSGLDSFMSHQVIKALRQLTIE-GKTVICTIHQPSTSVYHMADQLI 315
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYLCLSTVDRRSRERFIESNHQIAA 374
L G V YAGP + + +FG G+P P+ + ++ + + +S E + N +I
Sbjct: 316 LLSQGHVAYAGPAKQVDAFFGRCGYPIPKFVSSPDHF--MRVISHKSFETEDDYNKRIEK 373
Query: 375 LV 380
+V
Sbjct: 374 IV 375
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
+++ P IL DEPT LD V+ L + A G +I+T+ +P S V+ + V
Sbjct: 150 EILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADN-GMTVIITIHQPSSHVYSLFNNVC 208
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL-CLSTVD 326
+ G V+Y GP + F G+PCP NP + + L+ +D
Sbjct: 209 LMACGRVIYLGPGDQAVPLFEKCGYPCPAYYNPADHLIRTLAVID 253
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/134 (26%), Positives = 64/134 (47%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
+L+ +P +L DEPT LD V+ IL N A T I +P +++F D+++
Sbjct: 193 ELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTLI----HQPTAELFFQFDKII 248
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYLCLSTVDRRSRERFIESNHQIAA 374
+L +G + G + +F G P P+L NP + +V + + E+ +I
Sbjct: 249 FLSMGKTAFMGTPHESVKFFADCGHPIPKLFNPPEWIQSKLSVIPNNETKSRETIGKIIE 308
Query: 375 LVEKFKIEGQAIMQ 416
EK I ++I++
Sbjct: 309 FYEKSIIHQKSIVE 322
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
+++ DP IL DEPT LD V+ L + A K G II+ + +P S VF +V
Sbjct: 123 EILTDPKILFCDEPTSGLDAFMASEVVRALLDLANK-GKTIIVVLHQPSSTVFRMFHKVC 181
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIG--FPCPQLENP 293
++ G VY G L +F +G F P+ NP
Sbjct: 182 FMATGKTVYHGAVDRLCPFFDKLGPDFRVPESYNP 216
>AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical
protein Y47D3A.11 protein.
Length = 547
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +3
Query: 15 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
++I +P I+ DEPT LD + V+ L A + G II T+ +P S+V V
Sbjct: 123 EMINNPPIIFCDEPTTGLDSHMSLQVVKTLEQMALEKGKTIICTIHQPSSEV-------V 175
Query: 195 YLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL 308
+L G + + G + +F S G+ P NP Y++
Sbjct: 176 FLAQGRIAFHGAIDEAIHHFSSCGYQVPDHTNPADYFI 213
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LIRDP +LLLDE T LD + +V S L+NA+K T +I R D++V+
Sbjct: 570 LIRDPKVLLLDEATSALDAQSESVVQSALNNASKGRTTIMI----AHRLSTIREADKIVF 625
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
G +V AG L++ G
Sbjct: 626 FEKGVIVEAGNHEELVNLGG 645
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+RDP ILLLDE T LD + V L + A++ T I + R D +VY
Sbjct: 1236 LVRDPKILLLDEATSALDSESERAVQEAL-DRAREGRTCITIA---HRLSSIQNSDLIVY 1291
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V +G + L+ G
Sbjct: 1292 IDDGRVQESGTHKELMQLKG 1311
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/76 (38%), Positives = 40/76 (52%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LIRDP +LLLDE T LD + +V S L+NA+K T +I R D++V+
Sbjct: 582 LIRDPKVLLLDEATSALDAQSESIVQSALNNASKGRTTIMI----AHRLSTIREADKIVF 637
Query: 198 LCLGDVVYAGPTRNLL 245
G +V AG L+
Sbjct: 638 FEKGVIVEAGNHEELV 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+RDP ILLLDE T LD + V L + A++ T I + R D +VY
Sbjct: 1239 LVRDPKILLLDEATSALDSESERAVQEAL-DRAREGRTCITIA---HRLSSIQNSDLIVY 1294
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V AG L+ G
Sbjct: 1295 IDKGKVQEAGNHTQLMHQKG 1314
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/76 (38%), Positives = 40/76 (52%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LIRDP +LLLDE T LD + +V S L+NA+K T +I R D++V+
Sbjct: 582 LIRDPKVLLLDEATSALDAQSESIVQSALNNASKGRTTIMI----AHRLSTIREADKIVF 637
Query: 198 LCLGDVVYAGPTRNLL 245
G +V AG L+
Sbjct: 638 FEKGVIVEAGNHEELV 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+RDP ILLLDE T LD + V L + A++ T I + R D +VY
Sbjct: 1239 LVRDPKILLLDEATSALDSESERAVQEAL-DRAREGRTCITIA---HRLSSIQNSDLIVY 1294
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V AG L+ G
Sbjct: 1295 IDKGKVQEAGNHTQLMHQKG 1314
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/76 (38%), Positives = 40/76 (52%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LIRDP +LLLDE T LD + +V S L+NAAK T +I R D++V+
Sbjct: 570 LIRDPKVLLLDEATSALDAQSESVVQSALNNAAKGRTTIMI----AHRLSTIREADKIVF 625
Query: 198 LCLGDVVYAGPTRNLL 245
G +V +G L+
Sbjct: 626 FENGVIVESGNHEELV 641
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+RDP ILLLDE T LD + V L + A++ T I + R D +VY
Sbjct: 1230 LVRDPKILLLDEATSALDSESERAVQEAL-DRAREGRTCITIA---HRLSSIQNSDLIVY 1285
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V AG +L+ G
Sbjct: 1286 IDHGMVQEAGNHAHLMSLRG 1305
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 146
+G+ ++ P +LLLDEPT +DP ++ +IL N + GTA++LT
Sbjct: 1591 LGIAIVGLPDVLLLDEPTSGVDPKARRIIWNIL-NRLRDLGTALVLT 1636
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + +V S L NA++ T +I R D+++
Sbjct: 536 LVRNPKILLLDEATSALDAESESIVQSALENASRGRTTIVI----AHRLSTVRNADKIIV 591
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V+ G L++ G
Sbjct: 592 MKAGQVMEVGTHETLIEQKG 611
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 143
LIR+P ILLLDE T LD + + + +AA K T I++
Sbjct: 1185 LIRNPKILLLDEATSALD-TESEKQVQVALDAAAKDRTCIVV 1225
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + +V S L NA++ T +I R D+++
Sbjct: 536 LVRNPKILLLDEATSALDAESESIVQSALENASRGRTTIVI----AHRLSTVRNADKIIV 591
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V+ G L++ G
Sbjct: 592 MKAGQVMEVGTHETLIEQKG 611
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 143
LIR+P ILLLDE T LD + + + +AA K T I++
Sbjct: 1185 LIRNPKILLLDEATSALD-TESEKQVQVALDAAAKDRTCIVV 1225
>Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical
protein C30H6.6 protein.
Length = 677
Score = 35.1 bits (77), Expect = 0.052
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LI P I++LDE T LD + YL+ L N K + +++ R D+VVY
Sbjct: 567 LISKPKIMILDEATSALDATSDYLIRMTLDNLLKNHNLTVLVIAH--RLATMQQADQVVY 624
Query: 198 LCLGDVVYAGPTRNLLDYFGSI 263
+ G + G ++ SI
Sbjct: 625 VNRGRIEGQGTFDEMMKIQNSI 646
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 35.1 bits (77), Expect = 0.052
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R P++LLLDE T LD + + V +S K G +IL R D++V
Sbjct: 676 LVRQPVVLLLDEATSALDAESEHTVQEAISKNLK--GKTVILIAH--RLSTVENADKIVV 731
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
+ G V G + L++ G
Sbjct: 732 INKGKVEQLGNHKTLMEQEG 751
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+GV L+ +++LDEPT +DP V +L + +A++LT +
Sbjct: 1513 VGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHS-MDECEALCS 1571
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G ++ G ++ L +G+
Sbjct: 1572 RIAVLNRGSLIAIGSSQELKSLYGN 1596
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+GV L+ +++LDEPT +DP V +L + +A++LT +
Sbjct: 1500 VGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHS-MDECEALCS 1558
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G ++ G ++ L +G+
Sbjct: 1559 RIAVLNRGSLIAIGSSQELKSLYGN 1583
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+GV L+ +++LDEPT +DP V +L + +A++LT +
Sbjct: 1498 VGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHS-MDECEALCS 1556
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G ++ G ++ L +G+
Sbjct: 1557 RIAVLNRGSLIAIGSSQELKSLYGN 1581
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+GV L+ +++LDEPT +DP V +L + +A++LT +
Sbjct: 1513 VGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHS-MDECEALCS 1571
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G ++ G ++ L +G+
Sbjct: 1572 RIAVLNRGSLIAIGSSQELKSLYGN 1596
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/76 (36%), Positives = 35/76 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + +V L AAK T II R D ++
Sbjct: 569 LVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIII----AHRLSTIRNADLIIS 624
Query: 198 LCLGDVVYAGPTRNLL 245
G VV G R L+
Sbjct: 625 CKNGQVVEVGDHRALM 640
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/76 (36%), Positives = 35/76 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + +V L AAK T II R D ++
Sbjct: 569 LVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIII----AHRLSTIRNADLIIS 624
Query: 198 LCLGDVVYAGPTRNLL 245
G VV G R L+
Sbjct: 625 CKNGQVVEVGDHRALM 640
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+G+ L+ ++LDEPT +DP + I+ ++ +I+LT +
Sbjct: 1384 VGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSHS-MEECEALCT 1442
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G+++ G +++L +G+
Sbjct: 1443 RIGILRKGEMIALGTSQSLKSQYGN 1467
>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein
F55G11.9 protein.
Length = 1431
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+G+ L+ ++LDEPT +DP + I+ ++ +I+LT +
Sbjct: 1263 VGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSHS-MEECEALCT 1321
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G+++ G +++L +G+
Sbjct: 1322 RIGILRNGEMIALGTSQSLKSQYGN 1346
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/84 (22%), Positives = 38/84 (45%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+ V L+ P ++ LDEP+ +DP + + ++ K G A++LT +
Sbjct: 1352 VAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKS-GKAVVLTSHS-MEECEALCT 1409
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFG 257
R+ + G + G ++L +G
Sbjct: 1410 RIAIMDRGRIRCLGGKQHLKSKYG 1433
>AF003146-3|AAB54203.2| 252|Caenorhabditis elegans Abc transporter
family protein 6 protein.
Length = 252
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +3
Query: 6 IGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD 185
+G+ L+ ++LDEPT +DP + I+ ++ +I+LT +
Sbjct: 89 VGIALMSRASCIILDEPTAGIDPRARREIWDIIHEMREQGKCSIVLTSHS-MEECEALCT 147
Query: 186 RVVYLCLGDVVYAGPTRNLLDYFGS 260
R+ L G+++ G +++L +G+
Sbjct: 148 RIGILHRGEMIALGTSQSLKSQYGN 172
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
L+ P ILLLDE T LD N ++V L+ A++ T II
Sbjct: 551 LVTSPSILLLDEATSALDSHNEHIVNKALTKASEGRTTIII 591
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/76 (32%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
+IR P ILLLDE T LD + +V L +A T+II+ R D + Y
Sbjct: 1183 IIRKPKILLLDEATSALDTQSEEIVQKALRSATTG-RTSIIVA---HRLSTVQHCDTIYY 1238
Query: 198 LCLGDVVYAGPTRNLL 245
+ G V G L+
Sbjct: 1239 ISRGAVAEYGTHAELV 1254
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
++R+P +LLLDE T LD + +V + L A+++ T ++ R D +
Sbjct: 1156 ILRNPKLLLLDEATSALDTESEKIVQNALDTASERLSTIVV----AHRLSTIINADSIAV 1211
Query: 198 LCLGDVVYAGPTRNLL 245
L G VV G LL
Sbjct: 1212 LRNGKVVEQGTHNQLL 1227
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+++P ILLLDE T LD + V L A++ T II R D+++
Sbjct: 533 LVKNPAILLLDEATSALDSASERAVQLALKKASEGRTTIII----AHRLSTIRHCDKIMV 588
Query: 198 LCLGDVVYAGPTRNLL 245
+ G + G L+
Sbjct: 589 MSNGKIAEVGSHEELI 604
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
L+R+P ILLLDE T LD + +V L NA++ T ++
Sbjct: 475 LVRNPKILLLDEATSALDNESEQVVQKALENASQGRTTIVV 515
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
++R+P +LLLDE T LD + +V + L A+++ T ++
Sbjct: 1111 ILRNPKVLLLDEATSALDSDSEKVVQNALDTASERLSTVVV 1151
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
L+R+P ILLLDE T LD + +V L NA++ T ++
Sbjct: 534 LVRNPKILLLDEATSALDNESEQVVQKALENASQGRTTIVV 574
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
++R+P +LLLDE T LD + +V + L A+++ T ++
Sbjct: 1170 ILRNPKVLLLDEATSALDSDSEKVVQNALDTASERLSTVVV 1210
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
L+R+P ILLLDE T LD + +V L NA++ T ++
Sbjct: 534 LVRNPKILLLDEATSALDNESEQVVQKALENASQGRTTIVV 574
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
++R+P +LLLDE T LD + +V + L A+++ T ++
Sbjct: 1170 ILRNPKVLLLDEATSALDSDSEKVVQNALDTASERLSTVVV 1210
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
++R+P +LLLDE T LD + +V + L A+++ T ++ R D +
Sbjct: 1156 ILRNPKLLLLDEATSALDTESEKIVQNALDTASERLSTIVV----AHRLSTIINADSIAV 1211
Query: 198 LCLGDVVYAGPTRNLL 245
L G VV G LL
Sbjct: 1212 LRNGKVVEQGTHNQLL 1227
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+++P ILLLDE T LD + V L A++ T II R D+++
Sbjct: 533 LVKNPAILLLDEATSALDSASERAVQLALKKASEGRTTIII----AHRLSTIRHCDKIMV 588
Query: 198 LCLGDVVYAGPTRNLL 245
+ G + G L+
Sbjct: 589 MSNGKIAEVGSHEELI 604
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + ++V L A+ T ++ R ++++
Sbjct: 558 LVRNPRILLLDEATSALDNESEFIVQEALQKASIGRTTIVV----AHRLSTIRNANKIIV 613
Query: 198 LCLGDVVYAGPTRNLL 245
+ G++V G + L+
Sbjct: 614 MEKGEIVEVGDHKQLI 629
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
++R+P +LLLDE T LD + +V + L A+++ T ++
Sbjct: 1190 ILRNPKVLLLDEATSALDSDSEKVVQNALDTASERLSTVVV 1230
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
LIRDP +L+LDE T LD + +V L+ A++ +I R DR+
Sbjct: 702 LIRDPRVLILDEATSALDSESEAMVQEALNRCARERTVLVI----AHRLSTVRSADRIAV 757
Query: 198 LCLGDVVYAGPTRNLL 245
+ G+V G L+
Sbjct: 758 IEKGNVTEMGNHEELM 773
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 60 WDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLD-RVVYLCLGDVVYAGPTR 236
W ++ T VIS + + ++Y T +I T +KP V P + VVY+ G A TR
Sbjct: 271 WGVET-TTVRVISRVEDNGEQYRTTLIAT-DKPMQ-VSPVIKGSVVYMHKGTKTVAKCTR 327
Query: 237 NLLDYFGSIG 266
LLD G +G
Sbjct: 328 YLLDKIGDMG 337
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
L+R+P +L+LDE T LD + LV LS A++ I+
Sbjct: 667 LVRNPAVLILDEATSALDTESEALVQQALSRCAQERTVIIV 707
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+R+P ILLLDE T LD + +LV + G ++IL R D++V
Sbjct: 650 LVREPAILLLDEATSALDTESEHLVQEAIYKNLD--GKSVILIAH--RLSTVEKADKIVV 705
Query: 198 LCLGDVVYAGPTRNLL 245
+ G V G LL
Sbjct: 706 INKGRVEQIGNHETLL 721
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 140
LIR+P +L+LDE T LD + +V L+ AK+ +I
Sbjct: 526 LIRNPRVLILDEATSALDSESEGMVQEALNKCAKERTVIVI 566
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLV-ISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 194
L+ P IL++DE T LD + YLV I++ A T +I+ R D++V
Sbjct: 636 LVNKPNILIMDEATSALDASSEYLVRIALNKLLANSKQTVMIIA---HRLSTIKHADQIV 692
Query: 195 YLCLGDVVYAGPTRNLL 245
+ G V +G L+
Sbjct: 693 VVDRGSVAESGSYDELI 709
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 143
L+R P +LLLDE T LD + +V L +AAK+ T +++
Sbjct: 1182 LVRSPSVLLLDEATSALDTESEKIVQEAL-DAAKQGRTCLVI 1222
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+++P ILLLDE T LD V L A T I+ R +DR+
Sbjct: 552 LVKNPKILLLDEATSALDTEAEREVQGALDQAQAGRTTIIV----AHRLSTIRNVDRIFV 607
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
G++V +G L+ G
Sbjct: 608 FKAGNIVESGSHEELMSKQG 627
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 143
L+R P +LLLDE T LD + +V L +AAK+ T +++
Sbjct: 1182 LVRSPSVLLLDEATSALDTESEKIVQEAL-DAAKQGRTCLVI 1222
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
L+++P ILLLDE T LD V L A T I+ R +DR+
Sbjct: 552 LVKNPKILLLDEATSALDTEAEREVQGALDQAQAGRTTIIV----AHRLSTIRNVDRIFV 607
Query: 198 LCLGDVVYAGPTRNLLDYFG 257
G++V +G L+ G
Sbjct: 608 FKAGNIVESGSHEELMSKQG 627
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 585 LPIYFFILWIFYNEAKDYQRAFITKSGLIFNAMVGTYFVSIMNTI 719
LP+ ++L + +AKD+QR +GL+ T+ + + N I
Sbjct: 249 LPVLTYMLIVELKKAKDHQRITERTTGLVVFITASTFLIEVPNGI 293
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
++RDP ILLLDE T LD + +V L A + G ++ R D+++
Sbjct: 1182 IVRDPKILLLDEATSALDTESEKIVQEALDKA--RLGRTCVVIAH--RLSTIQNADKIIV 1237
Query: 198 LCLGDVVYAGPTRNLL 245
G + G + LL
Sbjct: 1238 CRNGKAIEEGTHQTLL 1253
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
++RDP ILLLDE T LD + +V L A + G ++ R D+++
Sbjct: 1182 IVRDPKILLLDEATSALDTESEKIVQEALDKA--RLGRTCVVIAH--RLSTIQNADKIIV 1237
Query: 198 LCLGDVVYAGPTRNLL 245
G + G + LL
Sbjct: 1238 CRNGKAIEEGTHQTLL 1253
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
protein B0464.2 protein.
Length = 1150
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 498 VWMLYLRTLATIFNLNKHGFKQMFMRLLCLPIYFFILWIFYNEAKDYQRAFITKSGLIFN 677
++M+ L + + L G KQ MR L + +++ + +AKD + F +K+ ++FN
Sbjct: 69 LFMMILESAGSRAGLEYEGVKQDQMRALDILAAYWMTQGYREKAKDKKSDFFSKATVLFN 128
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 18 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 197
++RDP ILLLDE T LD + +V L A + G ++ R D+++
Sbjct: 1168 IVRDPKILLLDEATSALDTESEKIVQEALDKA--RLGRTCVVIAH--RLSTIQNADKIIV 1223
Query: 198 LCLGDVVYAGPTRNLL 245
G + G + LL
Sbjct: 1224 CRNGKAIEEGTHQTLL 1239
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 387 FKIEGQAIMQGNLHENNRIVNPNKVQMNY---GKPGGFKTVWMLY 512
F I+G+ N ++N ++NP + Y G PG +W Y
Sbjct: 378 FVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAY 422
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 387 FKIEGQAIMQGNLHENNRIVNPNKVQMNY---GKPGGFKTVWMLY 512
F I+G+ N ++N ++NP + Y G PG +W Y
Sbjct: 328 FVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAY 372
>AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical
protein H14A12.3 protein.
Length = 292
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 261 CCRSSQASSSLVPRILHPRG 202
CCR AS +VP+ +HP+G
Sbjct: 234 CCRLVCASYQMVPKTVHPQG 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,523,141
Number of Sequences: 27780
Number of extensions: 390577
Number of successful extensions: 1166
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -