Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17i07
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   7.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 201 RWIRFSPNSLRYHYMH 248
           +W R +PN    HY+H
Sbjct: 511 QWPRLNPNEKSLHYLH 526


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 201 RWIRFSPNSLRYHYMH 248
           +W R +PN    HY+H
Sbjct: 511 QWPRLNPNEKSLHYLH 526


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 333 KSELDRFIAPEI*IY*YLLKSLEDIRYYYACNGT*DYWGKTLSSG 199
           K+ +  FI P+   +  L++  ED++Y+Y      D W   L+SG
Sbjct: 513 KAAIRIFIGPKYDSHHKLIEIPEDLKYFYEI----DNWMLDLNSG 553


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 333 KSELDRFIAPEI*IY*YLLKSLEDIRYYYACNGT*DYWGKTLSSG 199
           K+ +  FI P+   +  L++  ED++Y+Y      D W   L+SG
Sbjct: 513 KAAIRIFIGPKYDSHHKLIEIPEDLKYFYEI----DNWMLDLNSG 553


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 485 TQFINKKNTEQCLSSSTFFK*NTLLFWTPLF 577
           + + +K N ++   SS + K   ++ WTP F
Sbjct: 202 SDYTDKSNEKKIPKSSGWRKLRNIVHWTPFF 232


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 186 PTEVHRWIRFSPNSLR 233
           P  VHRW +F   S R
Sbjct: 240 PVPVHRWYKFIEGSSR 255


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 554 LLFWTPLFLCHCTKLIIKNC 613
           +L W P F  +  +   +NC
Sbjct: 19  ILCWLPFFTMYLVRAFCRNC 38


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 554 LLFWTPLFLCHCTKLIIKNC 613
           +L W P F  +  +   +NC
Sbjct: 467 ILCWLPFFTMYLVRAFCRNC 486


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 90  IRLPCREI 113
           IRLPCRE+
Sbjct: 387 IRLPCREV 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,691
Number of Sequences: 438
Number of extensions: 3317
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)