Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17h22
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD...    32   0.61 
AY069235-1|AAL39380.1|  437|Drosophila melanogaster GH28017p pro...    29   7.5  
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    29   7.5  
AE014296-1582|AAF50322.2|  563|Drosophila melanogaster CG4821-PC...    29   7.5  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    29   7.5  
BT028773-1|ABI34154.1|  203|Drosophila melanogaster IP01844p pro...    28   9.9  

>AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD
           protein.
          Length = 604

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 200 TVCSLHKVACASRFRSMTCIFSSAALKP*VPYTFDPSFGFFRY 328
           T+C LHK  C    R  T I   + L   +P  FD SF    Y
Sbjct: 398 TICPLHKRECVELIRFRTIIAMESCLDECLPSCFDLSFSAIAY 440


>AY069235-1|AAL39380.1|  437|Drosophila melanogaster GH28017p
           protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 372 CPRGFHFLGCSSVSLYRKNPKLGSKVY 292
           CPRG  F G SSV +Y  +P+  S  +
Sbjct: 120 CPRGHIFDGSSSVCVYSDSPRTSSSSF 146


>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
           protein.
          Length = 2382

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 372 CPRGFHFLGCSSVSLYRKNPKLGSKVY 292
           CPRG  F G SSV +Y  +P+  S  +
Sbjct: 246 CPRGHIFDGSSSVCVYSDSPRTSSSSF 272


>AE014296-1582|AAF50322.2|  563|Drosophila melanogaster CG4821-PC,
           isoform C protein.
          Length = 563

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 372 CPRGFHFLGCSSVSLYRKNPKLGSKVY 292
           CPRG  F G SSV +Y  +P+  S  +
Sbjct: 246 CPRGHIFDGSSSVCVYSDSPRTSSSSF 272


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
           isoform A protein.
          Length = 2786

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 372 CPRGFHFLGCSSVSLYRKNPKLGSKVY 292
           CPRG  F G SSV +Y  +P+  S  +
Sbjct: 246 CPRGHIFDGSSSVCVYSDSPRTSSSSF 272


>BT028773-1|ABI34154.1|  203|Drosophila melanogaster IP01844p
           protein.
          Length = 203

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 410 PHFVQFLVEGGPRVHVV 360
           PHFV  L+E GPR H V
Sbjct: 178 PHFVSHLLEHGPRSHTV 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,970,959
Number of Sequences: 53049
Number of extensions: 698925
Number of successful extensions: 1838
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)