Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17h15
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094864-1|AAM11217.1|  343|Drosophila melanogaster RE27552p pro...    65   1e-10
AE013599-1339|AAF58626.2|  343|Drosophila melanogaster CG13197-P...    65   1e-10
AF174134-1|AAF88148.1|  148|Drosophila melanogaster mRNA capping...    36   0.069
BT009965-1|AAQ22434.1|  649|Drosophila melanogaster RE70632p pro...    35   0.091
AE014298-2019|AAF48361.1|  649|Drosophila melanogaster CG1810-PA...    35   0.091

>AY094864-1|AAM11217.1|  343|Drosophila melanogaster RE27552p
           protein.
          Length = 343

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 34/100 (34%), Positives = 50/100 (50%)
 Frame = +2

Query: 389 KMFPARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSEEDVWTTEQIVKQNPSIGAII 568
           K  P RW  Y   G  +  +  I FK PL   + A V  E      E +++  P +G II
Sbjct: 3   KDIPDRWLKYKPIGDRVPGTRFIAFKVPLNQHVNAKV-KENLRLAPESLLQIVPDMGLII 61

Query: 569 DLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEF 688
           DLTNT++YY         +L++K+ +PG+  PS  + Q F
Sbjct: 62  DLTNTNRYYHPSAITNHDVLHQKLMIPGKQTPSHKLAQRF 101


>AE013599-1339|AAF58626.2|  343|Drosophila melanogaster CG13197-PA
           protein.
          Length = 343

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 34/100 (34%), Positives = 50/100 (50%)
 Frame = +2

Query: 389 KMFPARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSEEDVWTTEQIVKQNPSIGAII 568
           K  P RW  Y   G  +  +  I FK PL   + A V  E      E +++  P +G II
Sbjct: 3   KDIPDRWLKYKPIGDRVPGTRFIAFKVPLNQHVNAKV-KENLRLAPESLLQIVPDMGLII 61

Query: 569 DLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEF 688
           DLTNT++YY         +L++K+ +PG+  PS  + Q F
Sbjct: 62  DLTNTNRYYHPSAITNHDVLHQKLMIPGKQTPSHKLAQRF 101


>AF174134-1|AAF88148.1|  148|Drosophila melanogaster mRNA capping
           enzyme protein.
          Length = 148

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
 Frame = +2

Query: 398 PARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSE---EDVWTTEQIVKQNPSIGAII 568
           P RW    +    I     + FKTPL       +  E   +     E        +G  +
Sbjct: 16  PNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMPIECTFQPEMLFEYCKTLKVKLGLWV 75

Query: 569 DLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFID 694
           DLTNT ++YD       G  Y K+Q  G    PS      FI+
Sbjct: 76  DLTNTKRFYDRFAVEELGAKYIKLQCRGHGETPSPEQTHSFIE 118


>BT009965-1|AAQ22434.1|  649|Drosophila melanogaster RE70632p
           protein.
          Length = 649

 Score = 35.1 bits (77), Expect = 0.091
 Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
 Frame = +2

Query: 398 PARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSE---EDVWTTEQIVKQNPSIGAII 568
           P RW    +    I     + FKTPL       +  E   +     E        +G  +
Sbjct: 16  PNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMPIECTFQPEMLFEYCKTLKVKLGLWV 75

Query: 569 DLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFID 694
           DLTNT ++YD       G  Y K+Q  G    PS      FI+
Sbjct: 76  DLTNTKRFYDRSAVEELGAKYIKLQCRGHGETPSPEQTHSFIE 118


>AE014298-2019|AAF48361.1|  649|Drosophila melanogaster CG1810-PA
           protein.
          Length = 649

 Score = 35.1 bits (77), Expect = 0.091
 Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
 Frame = +2

Query: 398 PARWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSE---EDVWTTEQIVKQNPSIGAII 568
           P RW    +    I     + FKTPL       +  E   +     E        +G  +
Sbjct: 16  PNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMPIECTFQPEMLFEYCKTLKVKLGLWV 75

Query: 569 DLTNTSKYYDGVHFLRAGLLYKKIQVPGQ-TLPSESIVQEFID 694
           DLTNT ++YD       G  Y K+Q  G    PS      FI+
Sbjct: 76  DLTNTKRFYDRSAVEELGAKYIKLQCRGHGETPSPEQTHSFIE 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,400,008
Number of Sequences: 53049
Number of extensions: 516348
Number of successful extensions: 956
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)