Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17h09
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118281-1|AAM48310.1| 276|Drosophila melanogaster AT13922p pro... 194 1e-49
AF148686-1|AAD45272.1| 276|Drosophila melanogaster Kruppel homo... 194 1e-49
AE014134-1046|AAF52341.1| 276|Drosophila melanogaster CG9159-PA... 194 1e-49
BT022751-1|AAY55167.1| 572|Drosophila melanogaster IP14661p pro... 29 7.4
AY089307-1|AAL90045.1| 572|Drosophila melanogaster AT11139p pro... 29 7.4
AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p pro... 29 7.4
AE014134-3259|AAG22448.2| 300|Drosophila melanogaster CG18810-P... 29 7.4
AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB... 29 7.4
AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA... 29 7.4
AE013599-2157|AAF58079.1| 572|Drosophila melanogaster CG8388-PA... 29 7.4
U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic ba... 28 9.8
BT003476-1|AAO39479.1| 711|Drosophila melanogaster RE59350p pro... 28 9.8
AY928071-1|AAX78395.1| 627|Drosophila melanogaster hyperpolariz... 28 9.8
AY928070-1|AAX78394.1| 618|Drosophila melanogaster hyperpolariz... 28 9.8
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 28 9.8
AE014298-904|AAF46170.1| 738|Drosophila melanogaster CG3929-PA ... 28 9.8
AE013599-1869|ABC66060.1| 627|Drosophila melanogaster CG8585-PD... 28 9.8
AE013599-1868|ABC66059.1| 618|Drosophila melanogaster CG8585-PC... 28 9.8
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 28 9.8
>AY118281-1|AAM48310.1| 276|Drosophila melanogaster AT13922p
protein.
Length = 276
Score = 194 bits (472), Expect = 1e-49
Identities = 90/175 (51%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Frame = +2
Query: 131 ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 307
+ Q Q+ + +PA L H N+ID ALW +R++ + T+ YV P+F + SAF
Sbjct: 22 SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81
Query: 308 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 487
K +LANAA SALRLHQR+PA + SR+F+AR F EDS HY+ YSLIF N+ P+LL+L+P
Sbjct: 82 KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139
Query: 488 IFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFP 652
+ L+++LHA+SYSL +LD +GQNS W AR +IS+VEFQ+ NIL+A A EI + P
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMP 194
>AF148686-1|AAD45272.1| 276|Drosophila melanogaster Kruppel homolog
protein.
Length = 276
Score = 194 bits (472), Expect = 1e-49
Identities = 90/175 (51%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Frame = +2
Query: 131 ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 307
+ Q Q+ + +PA L H N+ID ALW +R++ + T+ YV P+F + SAF
Sbjct: 22 SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81
Query: 308 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 487
K +LANAA SALRLHQR+PA + SR+F+AR F EDS HY+ YSLIF N+ P+LL+L+P
Sbjct: 82 KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139
Query: 488 IFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFP 652
+ L+++LHA+SYSL +LD +GQNS W AR +IS+VEFQ+ NIL+A A EI + P
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMP 194
>AE014134-1046|AAF52341.1| 276|Drosophila melanogaster CG9159-PA
protein.
Length = 276
Score = 194 bits (472), Expect = 1e-49
Identities = 90/175 (51%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Frame = +2
Query: 131 ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFY 307
+ Q Q+ + +PA L H N+ID ALW +R++ + T+ YV P+F + SAF
Sbjct: 22 SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81
Query: 308 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 487
K +LANAA SALRLHQR+PA + SR+F+AR F EDS HY+ YSLIF N+ P+LL+L+P
Sbjct: 82 KVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIP 139
Query: 488 IFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFP 652
+ L+++LHA+SYSL +LD +GQNS W AR +IS+VEFQ+ NIL+A A EI + P
Sbjct: 140 VLLYSVLHASSYSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMP 194
>BT022751-1|AAY55167.1| 572|Drosophila melanogaster IP14661p
protein.
Length = 572
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 94 CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 195
CP T + N + K R+ W RH L S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533
>AY089307-1|AAL90045.1| 572|Drosophila melanogaster AT11139p
protein.
Length = 572
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 94 CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 195
CP T + N + K R+ W RH L S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533
>AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p
protein.
Length = 471
Score = 28.7 bits (61), Expect = 7.4
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = -1
Query: 510 CSSANKKIGTNINKLGTTFMKMSE*NR*CALSSRKNLA-------MKSREREISR--AGI 358
C+ N ++G +++L T MS N+ A+ + LA M R + R AG+
Sbjct: 143 CNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGV 202
Query: 357 L*CSRSAEVAAFASNAL*NADTGLLNNGNTYPMVH 253
C + E F S N L+ YPM H
Sbjct: 203 SSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNH 237
>AE014134-3259|AAG22448.2| 300|Drosophila melanogaster CG18810-PA
protein.
Length = 300
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 416 DSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVE 595
++ Y FY LI+ + + + +LH Y L +L NS + L+I ++
Sbjct: 137 ENYRYFFYFLIYFFLSCMISLTSSSIFIYVLHGGRYQLFMLTHPAPNSAYFNSLIIRIIY 196
Query: 596 FQSRNI 613
F+ +I
Sbjct: 197 FKLPDI 202
>AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB,
isoform B protein.
Length = 471
Score = 28.7 bits (61), Expect = 7.4
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = -1
Query: 510 CSSANKKIGTNINKLGTTFMKMSE*NR*CALSSRKNLA-------MKSREREISR--AGI 358
C+ N ++G +++L T MS N+ A+ + LA M R + R AG+
Sbjct: 143 CNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGV 202
Query: 357 L*CSRSAEVAAFASNAL*NADTGLLNNGNTYPMVH 253
C + E F S N L+ YPM H
Sbjct: 203 SSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNH 237
>AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA,
isoform A protein.
Length = 471
Score = 28.7 bits (61), Expect = 7.4
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = -1
Query: 510 CSSANKKIGTNINKLGTTFMKMSE*NR*CALSSRKNLA-------MKSREREISR--AGI 358
C+ N ++G +++L T MS N+ A+ + LA M R + R AG+
Sbjct: 143 CNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGV 202
Query: 357 L*CSRSAEVAAFASNAL*NADTGLLNNGNTYPMVH 253
C + E F S N L+ YPM H
Sbjct: 203 SSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNH 237
>AE013599-2157|AAF58079.1| 572|Drosophila melanogaster CG8388-PA
protein.
Length = 572
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 94 CPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESS 195
CP T + N + K R+ W RH L S
Sbjct: 500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRS 533
>U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic basic
protein protein.
Length = 737
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 85 NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 207
N + S+ +NTL + G +KS R + ++HP L +SH Q
Sbjct: 222 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 261
>BT003476-1|AAO39479.1| 711|Drosophila melanogaster RE59350p
protein.
Length = 711
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 85 NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 207
N + S+ +NTL + G +KS R + ++HP L +SH Q
Sbjct: 196 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 235
>AY928071-1|AAX78395.1| 627|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A3B1C1 protein.
Length = 627
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 181 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 238
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 239 NMASVFMRIF-NLICMM 254
>AY928070-1|AAX78394.1| 618|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A2B1C1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 172 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 229
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 230 NMASVFMRIF-NLICMM 245
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 836 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 893
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 894 NMASVFMRIF-NLICMM 909
>AE014298-904|AAF46170.1| 738|Drosophila melanogaster CG3929-PA
protein.
Length = 738
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 85 NFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHCQ 207
N + S+ +NTL + G +KS R + ++HP L +SH Q
Sbjct: 223 NSASVSSQYNTLPKLGDTKSLHRVPMTRQQHP-LPTSHQVQ 262
>AE013599-1869|ABC66060.1| 627|Drosophila melanogaster CG8585-PD,
isoform D protein.
Length = 627
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 181 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 238
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 239 NMASVFMRIF-NLICMM 254
>AE013599-1868|ABC66059.1| 618|Drosophila melanogaster CG8585-PC,
isoform C protein.
Length = 618
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 172 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 229
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 230 NMASVFMRIF-NLICMM 245
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIP-AREISLSRDFMARFFLE-DSAHYL 433
+ Y+F +FN S ++ L A A LRL + + R + LSR + R+ + + ++L
Sbjct: 844 LDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR--LVRYVSQWEEVYFL 901
Query: 434 FYSLIFMNVVPNLLILV 484
+ +FM + NL+ ++
Sbjct: 902 NMASVFMRIF-NLICMM 917
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,632,080
Number of Sequences: 53049
Number of extensions: 630556
Number of successful extensions: 1918
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1915
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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