Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17h05
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p pro... 116 2e-26
AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-P... 116 2e-26
BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p pro... 87 3e-17
BT022188-1|AAY51582.1| 387|Drosophila melanogaster IP01201p pro... 30 2.3
AE013599-935|AAF58895.1| 387|Drosophila melanogaster CG1663-PA ... 30 2.3
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 29 5.3
AE014297-3741|AAF56421.2| 807|Drosophila melanogaster CG13664-P... 29 7.0
X04132-2|CAA27748.1| 104|Drosophila melanogaster protein ( Dros... 28 9.3
>BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p
protein.
Length = 464
Score = 116 bits (280), Expect = 2e-26
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Frame = +2
Query: 110 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 289
T + +I NV+RT+D+++QLVK +KI E+S + ++F E + LA+I KD
Sbjct: 34 TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 90
Query: 290 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 466
++ K + VKG F P A A +VETV +K ++P+P I Q +
Sbjct: 91 ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 144
Query: 467 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYGPYANV 634
QFVKY GNL+ YS Y T++QKT+V L++ + S T+VKPFS I GPY NV
Sbjct: 145 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENV 200
>AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-PA
protein.
Length = 458
Score = 116 bits (280), Expect = 2e-26
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Frame = +2
Query: 110 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 289
T + +I NV+RT+D+++QLVK +KI E+S + ++F E + LA+I KD
Sbjct: 28 TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 84
Query: 290 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 466
++ K + VKG F P A A +VETV +K ++P+P I Q +
Sbjct: 85 ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 138
Query: 467 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYGPYANV 634
QFVKY GNL+ YS Y T++QKT+V L++ + S T+VKPFS I GPY NV
Sbjct: 139 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENV 194
>BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p
protein.
Length = 371
Score = 86.6 bits (205), Expect = 3e-17
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +2
Query: 383 AGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTV 562
A A +VETV +K ++P+P I Q + QFVKY GNL+ YS Y T++QKT+V L++ +
Sbjct: 24 AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNI 83
Query: 563 ESFTKVKPFSQVDGTIIYGPYANV 634
S T+VKPFS I GPY NV
Sbjct: 84 LSHTQVKPFSVSSNKITLGPYENV 107
>BT022188-1|AAY51582.1| 387|Drosophila melanogaster IP01201p
protein.
Length = 387
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Frame = +1
Query: 382 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 525
RR H K CC +C Q +T+ NSAR+ C+ CW+ L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361
>AE013599-935|AAF58895.1| 387|Drosophila melanogaster CG1663-PA
protein.
Length = 387
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Frame = +1
Query: 382 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 525
RR H K CC +C Q +T+ NSAR+ C+ CW+ L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 358 CGAQGTPKRRCHSKCCCRNCVHQ 426
CG QG +C + CRNC H+
Sbjct: 422 CGQQGHTAAKCQNPVDCRNCRHR 444
>AE014297-3741|AAF56421.2| 807|Drosophila melanogaster CG13664-PA
protein.
Length = 807
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 437 PYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIY 616
P +T D +++G YT + + T ++ + E + PFS V+ ++
Sbjct: 149 PVNVRVTDVNDNAPQWIGTPYTLTLSEVTVPGTRILQGARA-EDADQPGPFSTVEYQVLP 207
Query: 617 GPYA 628
GPY+
Sbjct: 208 GPYS 211
>X04132-2|CAA27748.1| 104|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 104
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 452 ITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKV 580
I++ E++ + Y GN YSP Y + +++TKTV+S V
Sbjct: 8 ISKTENKSI-YKGNFLFYSPKYKISIPKMGLIDTKTVDSTANV 49
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,760,837
Number of Sequences: 53049
Number of extensions: 591633
Number of successful extensions: 1340
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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