Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17g22
(755 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0595 - 4430738-4430785,4430904-4432679 71 1e-12
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 69 5e-12
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 53 3e-07
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 47 2e-05
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 46 4e-05
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 36 0.035
06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 34 0.14
01_06_1536 + 38075023-38075359,38075834-38075963,38076204-380764... 33 0.32
12_02_1224 + 27158810-27161366,27161593-27161969 31 0.75
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 31 0.99
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 29 3.0
06_01_0794 - 5923191-5923299,5923977-5924655,5924754-5925102 29 4.0
05_01_0326 - 2558237-2558344,2558605-2558706,2558867-2558944,255... 29 4.0
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 4.0
12_02_0675 + 21814048-21814368 29 5.3
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 29 5.3
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 29 5.3
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 29 5.3
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 7.0
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 28 7.0
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 7.0
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 70.5 bits (165), Expect = 1e-12
Identities = 40/116 (34%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVT 506
CA C + D + IV CDGC + VH CYG WFC C A
Sbjct: 408 CAVCGSTDGDPSDPIVFCDGCDLMVHASCYGNPLASFIPDGD-------WFCSVCTAAAA 460
Query: 507 D-----------PNCELCPNKGGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGV 641
P C LCP +GG K T W H+ CAL VP V F + + GV
Sbjct: 461 KKSKGNKPPPPPPRCCLCPARGGAMKRTTDARWAHIACALLVPEVFFRDPDGRDGV 516
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVT 506
CA C D+N+I+ C+ C + VH+ CYG W C AC+
Sbjct: 577 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGARDVQDFTN---------WVCRACELPKQ 627
Query: 507 DPNCELCPNKGGIFKETEVG-AWVHLVCALYVPGVAF 614
C LCP KGG K T++ WVH+ CA + P V+F
Sbjct: 628 KRECCLCPVKGGALKPTDIDQLWVHVTCAWFQPKVSF 664
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/79 (35%), Positives = 34/79 (43%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVT 506
CA C D+N+IV C+ C + VH+ CYG W C AC+
Sbjct: 545 CAVCRWVEDWDYNKIVICNRCQIAVHQECYG---------VRGKQDFTSWVCRACETPDQ 595
Query: 507 DPNCELCPNKGGIFKETEV 563
C LCP KGG K T V
Sbjct: 596 KRECCLCPVKGGALKPTNV 614
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVT 506
C C S + N+++EC C + VH+ CYG WFC+ CK
Sbjct: 1278 CCVCGISNLEPSNQLIECSKCFIKVHQACYGVLKVPRG----------QWFCKPCKINTQ 1327
Query: 507 DPNCELCPNKGG 542
D C LC GG
Sbjct: 1328 DTVCVLCGYGGG 1339
>02_05_0877 +
32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 12/115 (10%)
Frame = +3
Query: 336 CLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK--AGVTD 509
CLG S N ++ C+ C VTVH+ CYG K
Sbjct: 290 CLGESSTVSNSMLNCNRCKVTVHQKCYGLHVVPDGQWLCTWCKDLESLQSLKKDADNTLS 349
Query: 510 PNCELCPNKGGIFK-------ETEVGA---WVHLVCALYVPGVAFSEVERLSGVT 644
C LCP + G K +T G +VHL C+L+ PG ++E + VT
Sbjct: 350 MPCVLCPKEKGALKPVKGEPGQTAHGGNLKFVHLFCSLWTPGALVEDMESMEPVT 404
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 17/109 (15%)
Frame = +3
Query: 315 NLLICAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK 494
N L C C+ S + N I C C VH GCY PW CE C+
Sbjct: 1079 NALYCDVCMRSETV-LNRIFVCSRCKAAVHIGCYRNIENISG----------PWKCELCE 1127
Query: 495 ---------AGVTDPN--------CELCPNKGGIFKETEVGAWVHLVCA 590
+D N C+LC G F++T G W+H CA
Sbjct: 1128 DISPEDTCVGDQSDCNGTNLSLVQCDLCHGTSGAFRKTADGQWIHAFCA 1176
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 35.9 bits (79), Expect = 0.035
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK--AG 500
C+ C + N ++CD C + VH CYG W C C+ A
Sbjct: 509 CSVCDMDEEYEDNLFLQCDKCRMMVHARCYGELEPLNGVL---------WLCNLCRPEAP 559
Query: 501 VTDPNCELCPNKGGIF 548
P C LCP G F
Sbjct: 560 RVSPRCCLCPVTGHAF 575
>06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,
5588428-5588484,5588663-5588800,5588901-5588966,
5589234-5589452,5589522-5589737,5589813-5589884,
5589952-5590205,5590356-5590525,5590840-5591029,
5592211-5592331,5592838-5592921,5593003-5593365,
5594530-5594724,5594938-5595933,5596329-5596370
Length = 1240
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/98 (26%), Positives = 33/98 (33%), Gaps = 6/98 (6%)
Frame = +3
Query: 315 NLLICAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK 494
N L C C+ S + N I C C VH CY P A
Sbjct: 877 NALPCDICMRSETV-LNRIFVCSSCKAAVHLDCYRSVTNPTGPWKCELCQEMPSDVVAGS 935
Query: 495 AGVTDPN------CELCPNKGGIFKETEVGAWVHLVCA 590
D + C+LC G F++T G +H CA
Sbjct: 936 QSDCDGSKPCLLQCDLCHGTSGAFRKTIKGRCIHAFCA 973
>01_06_1536 +
38075023-38075359,38075834-38075963,38076204-38076419,
38076520-38077137,38077226-38078075
Length = 716
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 288 EFKFPGELANLLICAGCLGSRSDDFNEIVECDGCGVTVHEGCYG 419
+F+ L N + C G++ DD ++ CD CGV H C G
Sbjct: 609 QFRMERGLENWTVDCTC-GAKDDDGERMLACDVCGVWQHTRCSG 651
>12_02_1224 + 27158810-27161366,27161593-27161969
Length = 977
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 471 PWFCEACKAGVTDPNCELCPNKGGIFKETEVGA-WVHLVCAL 593
P C A + +TDP LCP + G+ WV VCAL
Sbjct: 570 PGLCVAFRLNLTDPALPLCPKPARLRMRGLAGSVWVVAVCAL 611
>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 324 ICAGCLGSRSDDFNEIVECDGCGVTVHEGC 413
+C GC + DD +IV CDGC H C
Sbjct: 1142 LCRGCFQDKDDD--QIVMCDGCDEGYHIYC 1169
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 309 LANLLICAGCLGSRSDDFNEIVECDGCGVTVHEGC 413
L++L G +GSR D + C CGV H GC
Sbjct: 93 LSSLTTAQG-VGSRGADAVVVHRCSVCGVAAHSGC 126
>06_01_0794 - 5923191-5923299,5923977-5924655,5924754-5925102
Length = 378
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 492 KAGVTDPNCELCPNKGGIFKETEVGAWVHLVCALYVPGVAFS----EVERLSGVTLFENG 659
+A V P + P+ GI+ + ++ AW +V A++ G F V R+S NG
Sbjct: 63 EATVISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNG 122
Query: 660 LFSLGST 680
+ ST
Sbjct: 123 QAPISST 129
>05_01_0326 -
2558237-2558344,2558605-2558706,2558867-2558944,
2559024-2559089,2559885-2559975,2560414-2560490,
2560905-2561114,2561202-2561319,2561824-2561921,
2562037-2562102,2562189-2562351,2563542-2563674,
2563760-2563793
Length = 447
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 252 SAIDVLEKAKKHEFKFPGELANLLICAGCLGSRSDDFNEIV-ECDGCGVTVHEGCY 416
+AI +LE+ K H K GE L+ A R+D IV + G+ +++ CY
Sbjct: 129 AAIMLLEEMKAHGVKLKGETYTCLLNALAATGRTDQVYAIVRDMTAAGLGLNKFCY 184
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 342 GSRSDDFNEIVECDGCGVTVHEGC 413
G DD E+V CD C V VH C
Sbjct: 254 GITYDDGEEMVSCDECNVWVHTRC 277
>12_02_0675 + 21814048-21814368
Length = 106
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 361 KSSLREPRHPAQIKRLASSPGNLNSCFLAFSRTSIAE 251
K R PR P +++ A PG+L + A T +A+
Sbjct: 47 KGPYRRPRKPTEVRSQAKCPGDLRAQSRALKATELAQ 83
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 28.7 bits (61), Expect = 5.3
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 171 EKNASEEETGSDDDDFKGSS--NKIGEEASAIDVLEKAKKH--EFKFPGELANLLICAGC 338
E ++E+ SDDD+ +G N GEE D E E GE A+
Sbjct: 402 EDEYTDEDGDSDDDEDEGEEDDNDEGEEDDDEDRSENDDDDGAETGRSGEQADA--ATNV 459
Query: 339 LGSRSDDFNEIVECDGCGVTVHEGCYG 419
+G + DD NE + G V GC G
Sbjct: 460 IGCKGDDTNEGIGSGGKDVDDVTGCKG 486
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 342 GSRSDDFNEIVECDGCGVTVHEGCYG 419
G++ DD ++ CD C V H C G
Sbjct: 644 GAQDDDGERMIACDACDVWHHTRCVG 669
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/93 (26%), Positives = 36/93 (38%)
Frame = -2
Query: 745 QHRIPHTLLYVPESHLHIVRKNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKCTQA 566
Q +P TL + L L KPF K VTP + S G+ S+ T Q
Sbjct: 153 QEPVPETLAKLSHEVLEAASPQ-LAELIKPFVKLVTPSNNNPSNGHADGSCSSSTGLPQT 211
Query: 565 PTSVSLKIPPLLGHNSQLGSVTPALQASQNHGS 467
P + ++ LGS Q S++ G+
Sbjct: 212 QVDPKTNDEPKI--DTSLGSQPLDTQNSKSSGA 242
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 165 KYEKNASEEETGSDDDDFKGSSNKIGEEASAIDVLEKAKKHE 290
K A E E+G D DD KG S + EK +KH+
Sbjct: 117 KSNHTAHEPESGGDADDTKGDRQSQRVPKSPLLTREKERKHK 158
>10_08_0894 -
21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 195 TGSDDDDFKGSSNKIGEEASAIDVL 269
TGS DDDF ++IG+E S D++
Sbjct: 330 TGSLDDDFDSLLSEIGKEISMADII 354
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +3
Query: 321 LICAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAG 500
++C C +R D N ++ CD C + H C G W+C C++G
Sbjct: 460 VVCIEC--NRGGDDNLMLLCDICDSSAHTYCVGLGRQVPEGN---------WYCGGCRSG 508
Query: 501 VTDPNCE 521
P+ +
Sbjct: 509 GEGPSAQ 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,659,592
Number of Sequences: 37544
Number of extensions: 318976
Number of successful extensions: 1078
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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