Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17g22
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 93 3e-19
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 68 6e-12
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 68 6e-12
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 62 4e-10
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 62 4e-10
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 58 5e-09
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 32 0.51
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 29 2.7
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 29 2.7
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 6.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 6.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 6.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 6.2
AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribo... 28 6.2
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribo... 28 6.2
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 92.7 bits (220), Expect = 3e-19
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Frame = +3
Query: 174 KNASEEETGSD---DDDFKGSSNKIGEEASAIDVLEKAKKHEFKFPGELANLLICAGCLG 344
K SE ++GSD + D + S ++ +E A + E ++K E + P + +IC C+
Sbjct: 56 KTGSEADSGSDSQENSDEEESEDEENDEEEA-ESAESSEKPE-RTPSAEKDAVICGVCIN 113
Query: 345 SRSD-DFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVT-DPNC 518
R+ + ++C CG+ VHE CYG W+CE C G+T P+C
Sbjct: 114 QRNIVAAGDFLQCQKCGINVHESCYG--------TLPGGSDDASWYCEPCLYGLTLPPHC 165
Query: 519 ELCPNKGGIFKETEV-GAWVHLVCALYVPGVAFSEVERLSGVT 644
E CP++ G FK ++ G W H +CALY GV +++ GV+
Sbjct: 166 EFCPSRFGAFKRADIRGRWAHAICALYTHGVNYAQTHTRCGVS 208
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 664 SRWGARSCALCEDVTLARTGVCVGCDAGLC 753
+ +G R+C C D AR G+ C++G+C
Sbjct: 216 AHFGRRTCTACTDKIEARFGIASRCESGMC 245
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDG--CGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEAC-KA 497
C C N ++ CDG C V VH+GCYG WFC C KA
Sbjct: 8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGE----------WFCAKCTKA 57
Query: 498 GVTDPN--------CELCPNKGGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTL 647
P C+LCP G K+T+ W H++CALY+P V F V + V L
Sbjct: 58 SAMMPGSINEATFCCQLCPFDYGALKKTDRNGWAHVICALYIPEVRFGNVHSMEPVIL 115
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDG--CGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEAC-KA 497
C C N ++ CDG C V VH+GCYG WFC C KA
Sbjct: 8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGE----------WFCAKCTKA 57
Query: 498 GVTDPN--------CELCPNKGGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTL 647
P C+LCP G K+T+ W H++CALY+P V F V + V L
Sbjct: 58 SAMMPGSINEATFCCQLCPFDYGALKKTDRNGWAHVICALYIPEVRFGNVHSMEPVIL 115
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 62.1 bits (144), Expect = 4e-10
Identities = 35/113 (30%), Positives = 50/113 (44%)
Frame = +3
Query: 324 ICAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGV 503
+C CL + + N+IV CD C ++VH+ CYG E C AG
Sbjct: 197 VCNICLDGDTSNCNQIVYCDRCNLSVHQDCYG-------IPFIPEGCLECRRCGISPAGR 249
Query: 504 TDPNCELCPNKGGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFENGL 662
NC LCP+ G FK+ + WVH++C ++V F + V E L
Sbjct: 250 V--NCVLCPSTTGAFKQVDQKRWVHVLCVIWVDETHFGNTIFMENVQNVEKAL 300
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 574 CIWFVHSTSLGLHFQR*NVYQV*LFSKMAYSRWGARSCALCEDVTLARTGVCVGCDAGLC 753
C+ +V T G NV V K + R A SC LC++ AR G C+ C C
Sbjct: 275 CVIWVDETHFGNTIFMENVQNV---EKALHDR-RALSCLLCKNRQNARMGACIQCSETKC 330
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 62.1 bits (144), Expect = 4e-10
Identities = 35/113 (30%), Positives = 50/113 (44%)
Frame = +3
Query: 324 ICAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGV 503
+C CL + + N+IV CD C ++VH+ CYG E C AG
Sbjct: 197 VCNICLDGDTSNCNQIVYCDRCNLSVHQDCYG-------IPFIPEGCLECRRCGISPAGR 249
Query: 504 TDPNCELCPNKGGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFENGL 662
NC LCP+ G FK+ + WVH++C ++V F + V E L
Sbjct: 250 V--NCVLCPSTTGAFKQVDQKRWVHVLCVIWVDETHFGNTIFMENVQNVEKAL 300
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 574 CIWFVHSTSLGLHFQR*NVYQV*LFSKMAYSRWGARSCALCEDVTLARTGVCVGCDAGLC 753
C+ +V T G NV V K + R A SC LC++ AR G C+ C C
Sbjct: 275 CVIWVDETHFGNTIFMENVQNV---EKALHDR-RALSCLLCKNRQNARMGACIQCSETKC 330
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/111 (33%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK-AGV 503
C C S D +E+V CD C VH C G EPW C C G
Sbjct: 240 CDVCRISDCDVADEMVFCDMCNTCVHMVCAGIEELPDPA--------EPWKCAKCAHMGT 291
Query: 504 TDPNCELCPNKGGIFK-ETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFE 653
P C LCP GG + W H CAL++P + F E + +T FE
Sbjct: 292 PCPPCVLCPALGGSMTYSADKTQWAHHSCALFIPEIIFENEELRAPMTSFE 342
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/111 (33%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +3
Query: 327 CAGCLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACK-AGV 503
C C S D +E+V CD C VH C G EPW C C G
Sbjct: 281 CDVCRISDCDVADEMVFCDMCNTCVHMVCAGIEELPDPA--------EPWKCAKCAHMGT 332
Query: 504 TDPNCELCPNKGGIFK-ETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFE 653
P C LCP GG + W H CAL++P + F E + +T FE
Sbjct: 333 PCPPCVLCPALGGSMTYSADKTQWAHHSCALFIPEIIFENEELRAPMTSFE 383
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +3
Query: 336 CLGSRSDDFNEIVECDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVTD-P 512
C +S D +E++ CDGC H C+ WFC+ C+ + P
Sbjct: 1089 CQICKSMDGDEMLVCDGCESGCHMECF--------RPRMTKVPEGDWFCQRCREEKSGRP 1140
Query: 513 NCELCPNKGGIFKETEVGAW-VHLVCA 590
C C + G + + A+ VH C+
Sbjct: 1141 MCMFCSRETGNLHQCQRCAYHVHQECS 1167
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -2
Query: 754 YTSQHRIPHTLLYVPESHLHIVRKNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKC 575
Y+S + T + SH +I+ N L + N P ++ TPGT S K
Sbjct: 598 YSSSDQYERTSNVMKPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKK 657
Query: 574 TQAPTSVSLK 545
+ P+S L+
Sbjct: 658 EKKPSSGILR 667
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -2
Query: 754 YTSQHRIPHTLLYVPESHLHIVRKNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKC 575
Y+S + T + SH +I+ N L + N P ++ TPGT S K
Sbjct: 504 YSSSDQYERTSNVMKPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKK 563
Query: 574 TQAPTSVSLK 545
+ P+S L+
Sbjct: 564 EKKPSSGILR 573
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -2
Query: 754 YTSQHRIPHTLLYVPESHLHIVRKNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKC 575
Y+S + T + SH +I+ N L + N P ++ TPGT S K
Sbjct: 598 YSSSDQYERTSNVMKPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKK 657
Query: 574 TQAPTSVSLK 545
+ P+S L+
Sbjct: 658 EKKPSSGILR 667
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -2
Query: 754 YTSQHRIPHTLLYVPESHLHIVRKNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKC 575
Y+S + T + SH +I+ N L + N P ++ TPGT S K
Sbjct: 504 YSSSDQYERTSNVMKPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKK 563
Query: 574 TQAPTSVSLK 545
+ P+S L+
Sbjct: 564 EKKPSSGILR 573
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -2
Query: 685 KNVLPNENKPFSKRVTPDKRSTSENATPGT*SAQTKCTQ---APTSVSLKIPPLLGHNSQ 515
K+VLP+++ ++PDK ++ + P S T+ T+ + T S K PP+ S
Sbjct: 48 KDVLPSKSMKMKVSISPDKSASKKLRVPSKESEDTQPTKSDASQTEKSTKKPPVTLVESS 107
Query: 514 LGSVTPALQA 485
VT A+++
Sbjct: 108 -ADVTTAVES 116
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 234 KIGEEASAIDVLEKAKKHEFKFPGELANLLI 326
K GEE +D L K ++H F F +L+ LLI
Sbjct: 161 KTGEEELKLDGLIKLERHGFHFLAQLSTLLI 191
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 183 SEEETGSDDDDFKGSSNKIGEEASAIDVLEKAKKHEFKFPGELAN 317
SEE++ D+ KGS ++ G +D E +E FP + AN
Sbjct: 559 SEEQSEGDETSNKGSKDENGNMLDDVD-QENTSDNEISFPDDEAN 602
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 348 RSDDFNEIVECDGCGVTVHEGC 413
R +++ C+ CG+ VH+GC
Sbjct: 112 RKQHLDDVYACNVCGIRVHKGC 133
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 348 RSDDFNEIVECDGCGVTVHEGC 413
R +++ C+ CG+ VH+GC
Sbjct: 116 RKQHLDDVYACNVCGIRVHKGC 137
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 348 RSDDFNEIVECDGCGVTVHEGC 413
R +++ C+ CG+ VH+GC
Sbjct: 112 RKQHLDDVYACNVCGIRVHKGC 133
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 348 RSDDFNEIVECDGCGVTVHEGC 413
R +++ C+ CG+ VH+GC
Sbjct: 116 RKQHLDDVYACNVCGIRVHKGC 137
>AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme 4 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 501 VTDPNCELCPNK-GGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFE 653
+T CE+ P K + + E + H+ CA + + FS+ RLS + + +
Sbjct: 128 ITKSACEVLPEKIYRLVGDIESATFSHIQCASLIAWMFFSDTPRLSFIIILQ 179
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 378 CDGCGVTVHEGCYGXXXXXXXXXXXXXXXXEPWFCEACKAGVTDPNCELCPNKGG 542
C GC + GC G C C G P C CPN G
Sbjct: 34 CGGCSGN-NCGCNGNNCGPQVTVVQVPNNNNGCSCNPCNGGGCAPRCSYCPNNFG 87
>AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 4 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 501 VTDPNCELCPNK-GGIFKETEVGAWVHLVCALYVPGVAFSEVERLSGVTLFE 653
+T CE+ P K + + E + H+ CA + + FS+ RLS + + +
Sbjct: 128 ITKSACEVLPEKIYRLVGDIESATFSHIQCASLIAWMFFSDTPRLSFIIILQ 179
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 324 ICAGCLGSRSDDFNEIVECDGCGVTVHEGC 413
+CA C + DD+ +++CD C + H+ C
Sbjct: 220 VCAEC--NLKDDWTRMLKCDFCDLIWHQKC 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,268,826
Number of Sequences: 27780
Number of extensions: 281398
Number of successful extensions: 1142
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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