Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17g11
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical ... 29 3.4
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 28 5.9
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 28 5.9
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 28 5.9
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 28 5.9
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 28 5.9
AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 28 5.9
Z93393-9|CAB07695.1| 190|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z35663-10|CAA84731.1| 278|Caenorhabditis elegans Hypothetical p... 27 7.8
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 352 DSGVGRCS-SQSGSERESDETPRGAEQSAPVDIPDSE 459
D+ V CS S S SE S +PR AE+ APV +PD E
Sbjct: 1327 DTNVITCSKSNSTSESSSTSSPRRAEK-APVPLPDYE 1362
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 352 DSGVGRCS-SQSGSERESDETPRGAEQSAPVDIPDSE 459
D+ V CS S S SE S +PR AE+ APV +PD E
Sbjct: 1327 DTNVITCSKSNSTSESSSTSSPRRAEK-APVPLPDYE 1362
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +1
Query: 541 FQDLYKLTGEVLGEGAYASV 600
F D YKLT E LG GAY SV
Sbjct: 198 FFDYYKLTDEHLGSGAYGSV 217
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +1
Query: 541 FQDLYKLTGEVLGEGAYASV 600
F D YKLT E LG GAY SV
Sbjct: 196 FFDYYKLTDEHLGSGAYGSV 215
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 446 MSTGADCSAPLGVSSDSRSLPDWLLQRP-TPLSTLSSDTFLT 324
M+T DC++ SS S +PDWL+ R T + +SD F +
Sbjct: 309 MNTPEDCASMNTASSRSWMVPDWLIYRKFTNSNHPNSDIFFS 350
>AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical
protein Y58G8A.4a protein.
Length = 397
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 265 VHLLVLNIIIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPR 417
V LL + +AV TY K+++KVS++ + C S + +R SD T R
Sbjct: 231 VMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQFCQSLTQKQR-SDATSR 280
>AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical
protein Y58G8A.4b protein.
Length = 433
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 265 VHLLVLNIIIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPR 417
V LL + +AV TY K+++KVS++ + C S + +R SD T R
Sbjct: 231 VMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQFCQSLTQKQR-SDATSR 280
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 319 KMVKKVSEESVDSGVGRCSSQSGSERESDETPRGAEQSA-------PVDIPDSED 462
K +K + D V S++ +E S E P AEQ+A P+ I +SED
Sbjct: 1157 KKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVPASAEQAAEPSTEAEPIVIDESED 1211
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 528 FTTILLFLLLAATLFGILFMVCKQTLHK 555
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 528 FTTILLFLLLAATLFGILFMVCKQTLHK 555
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 528 FTTILLFLLLAATLFGILFMVCKQTLHK 555
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 476 FTTILLFLLLAATLFGILFMVCKQTLHK 503
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 528 FTTILLFLLLAATLFGILFMVCKQTLHK 555
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 128 FSTVVLFSLISRIIFGVFFFLHLLTLYR 211
F+T++LF L++ +FG+ F + TL++
Sbjct: 528 FTTILLFLLLAATLFGILFMVCKQTLHK 555
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 319 KMVKKVSEESVDSGVGRCSSQSGSERESDETPRGAEQSA-------PVDIPDSED 462
K +K + D V S++ +E S E P AEQ+A P+ I +SED
Sbjct: 1157 KKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVPASAEQAAEPSTEAEPIVIDESED 1211
>AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 337 SEESVDSGVGRCSSQSGSERESDETPR 417
S ESV+S CSS+S +ERE++ R
Sbjct: 71 SAESVNSIKSSCSSRSSAERETERAQR 97
>Z93393-9|CAB07695.1| 190|Caenorhabditis elegans Hypothetical
protein Y48E1B.11 protein.
Length = 190
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 103 LPAQFTYILLDGGAFFVNFSNYFRRF--FFPSSFNAVPISRREGDRH 237
+P F Y+ D + NF++ FR+ P FN + I D H
Sbjct: 6 VPCIFKYLSFDKKSHLANFNSIFRKLEKKLPYHFNCIKIDTTREDWH 52
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 313 AIKMVKKVSEESVDSGVGRCSSQSGSERESDE 408
AIK+ K SE+++ S + +S+SGS + E
Sbjct: 462 AIKLSKSQSEQNISSSKSKSASRSGSRSKRSE 493
>Z35663-10|CAA84731.1| 278|Caenorhabditis elegans Hypothetical
protein T04A8.12 protein.
Length = 278
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 62 AVFYSVF*ECLFITFRHNLRTSFSTVVLFSLI--SRIIFGVFFFLHLLTLYRFHVEKATA 235
A+F F ++ +RHN LF+L+ S ++ +FF H Y FH +
Sbjct: 201 AIFVLCFFLGAYLYWRHNTYCEPGIYTLFALVEYSAVLSNIFF--HCTLYYDFHGKNIVL 258
Query: 236 TS 241
TS
Sbjct: 259 TS 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,158,868
Number of Sequences: 27780
Number of extensions: 216438
Number of successful extensions: 768
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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