Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17g07
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.19
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 25 0.77
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.4
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.4
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 9.4
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 9.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 9.4
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 9.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 21 9.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 9.4
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.6 bits (56), Expect = 0.19
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 496 SIPARVELMPSVLT-TMGGRVRLECKXSARXPPRITWYK 609
++P R L P+ G R+ECK P++TW K
Sbjct: 676 NVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKK 714
Score = 24.6 bits (51), Expect = 0.77
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 495 QYSSPSGAYAVSVDYHGREGAAG 563
QY S G Y D++G G+ G
Sbjct: 1819 QYGSQYGQYGAPYDHYGSRGSVG 1841
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.6 bits (51), Expect = 0.77
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 152 AASTASEPTWPGAPTALPPPS 214
AA T++ P++PG ++ P PS
Sbjct: 74 AAITSTSPSYPGGGSSSPSPS 94
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 493 YSIPARVELMPSVLTTMGGRVRLECKXSARXPPRITW 603
Y +P + L+P V G +RL+C + I W
Sbjct: 517 YGLPY-IRLIPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 544 GGRVRLECKXSARXPPRITW 603
G V L+C + P++TW
Sbjct: 436 GPAVSLKCSAAGNPTPQVTW 455
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 493 YSIPARVELMPSVLTTMGGRVRLECKXSARXPPRITW 603
Y +P + L+P V G +RL+C + I W
Sbjct: 517 YGLPY-IRLIPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 544 GGRVRLECKXSARXPPRITW 603
G V L+C + P++TW
Sbjct: 436 GPAVSLKCSAAGNPTPQVTW 455
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 312 RERSRDRRGRGRSREHRIIPS 332
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 64 RERSRDRRERGRSREHRIIPS 84
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 438 RRAERDGRAAPPLREHDIVPS 376
R RD R REH I+PS
Sbjct: 313 RERSRDRRERGRSREHRIIPS 333
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 105 AQRRAPAGLHRAIAALARSSLPTHGAA 25
AQR A + R AL + LP H AA
Sbjct: 741 AQRERAADMKRRNGALIYNILPPHVAA 767
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 312 DDGVLVQPAAAVSQHAADLHGGGVGGQRLHARLEGGGS 199
D+G P +AV + + ++G G G L G +
Sbjct: 577 DEGGKTSPNSAVRKCMSPINGSGASGSGSAENLSSGSN 614
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 548 PPMVVNTDGISSTRAGILYP 489
P M + +S+T AG++YP
Sbjct: 827 PYMFLPVSYMSTTMAGVIYP 846
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = +1
Query: 541 MGGRVRLECKXSARXPPRITW 603
+G V ++C + PP + W
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVW 344
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 53 RPPHPRLRREAEPEAEP 69
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 109 RPPHPRLRREAEPEAEP 125
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 165 RPPHPRLRREAEPEAEP 181
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 193 RPPHPRLRREAEPEAEP 209
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 221 RPPHPRLRREAEPEAEP 237
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 54 RPPHPRLRREAEPEAEP 70
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 82 RPPHPRLRREAEPEAEP 98
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 110 RPPHPRLRREAEPEAEP 126
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 54 RPPHPRLRREAEPKAEP 70
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 486 VWIQYSSPSGAYAVSVDYHGREGAAGV 566
VW Y + GA+++S G GV
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGV 462
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 25 RPPHPRLRREAEPEAEP 41
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 53 RPPHPRLRREAEPEAEP 69
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 81 RPPHPRLRREAEPEAEP 97
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 109 RPPHPRLRREAEPEAEP 125
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 145 QPPRPHSTRTAQPSTTP 95
+PP P R A+P P
Sbjct: 165 RPPHPRLRREAEPEAEP 181
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 453 PGPLQRRAERDGRAAPPLREHDIVPS 376
P P A++ +PPL +D P+
Sbjct: 184 PDPHDETAKKPRVLSPPLNNNDATPT 209
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 486 VWIQYSSPSGAYAVSVDYHGREGAAGV 566
VW Y + GA+++S G GV
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGV 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,193
Number of Sequences: 438
Number of extensions: 2547
Number of successful extensions: 49
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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