Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17f23
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p pro...    59   2e-09
AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-P...    59   2e-09
L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein...    29   1.9  
BT009979-1|AAQ22448.1|  171|Drosophila melanogaster RE55548p pro...    28   4.4  
AE014298-937|AAF46191.1|  318|Drosophila melanogaster CG14440-PA...    28   4.4  
AE014296-1803|AAN11922.1|  283|Drosophila melanogaster CG6611-PC...    28   4.4  
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro...    27   5.8  
BT003781-1|AAO41462.1|  280|Drosophila melanogaster RE01075p pro...    27   5.8  
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA...    27   5.8  

>AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p
           protein.
          Length = 79

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +3

Query: 129 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 299
           DLG           PAE++   D D+E+++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 21  DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-PA
           protein.
          Length = 79

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +3

Query: 129 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 299
           DLG           PAE++   D D+E+++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 21  DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
           P-glycoprotein/multidrug resistanceprotein protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/42 (26%), Positives = 29/42 (69%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 302
           +N+  +D D+E++ V  ++ ++DV+  D  +  +++++K+KD
Sbjct: 655 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKMKKVKD 695


>BT009979-1|AAQ22448.1|  171|Drosophila melanogaster RE55548p
           protein.
          Length = 171

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 207 HHQRLLYPNFPREILRTRHPLLANQGLLSVCQPLH 103
           HH RL + N P   L  R P       LS   P+H
Sbjct: 15  HHSRLYFLNSPTAPLTARDPFFIKPEYLSYESPMH 49


>AE014298-937|AAF46191.1|  318|Drosophila melanogaster CG14440-PA
           protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 207 HHQRLLYPNFPREILRTRHPLLANQGLLSVCQPLH 103
           HH RL + N P   L  R P       LS   P+H
Sbjct: 15  HHSRLYFLNSPTAPLTARDPFFIKPEYLSYESPMH 49


>AE014296-1803|AAN11922.1|  283|Drosophila melanogaster CG6611-PC,
           isoform C protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 174 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ-QLEKLK 299
           + N G    DDE+    +D+ +DD+I DD  +  R+ Q+ K K
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREAQITKQK 254


>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
           protein.
          Length = 1313

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/42 (26%), Positives = 28/42 (66%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 302
           +N+  +D D+E++ V  ++ ++DV+  D  +  +++ +K+KD
Sbjct: 685 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKKKKVKD 725


>BT003781-1|AAO41462.1|  280|Drosophila melanogaster RE01075p
           protein.
          Length = 280

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 174 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
           + N G    DDE+    +D+ +DD+I DD  +  R+  E
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREARE 250


>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
           protein.
          Length = 1313

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/42 (26%), Positives = 28/42 (66%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 302
           +N+  +D D+E++ V  ++ ++DV+  D  +  +++ +K+KD
Sbjct: 685 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKKKKVKD 725


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,462,076
Number of Sequences: 53049
Number of extensions: 221952
Number of successful extensions: 834
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)