Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17f21
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007451-1|AAH07451.1|  374|Homo sapiens XPA binding protein 1, ...    31   4.3  
AJ010842-1|CAA09376.1|  358|Homo sapiens ATP(GTP)-binding protei...    31   4.3  
AC074091-4|AAX93201.1|  374|Homo sapiens unknown protein.              31   4.3  
AB044661-1|BAB17612.1|  374|Homo sapiens XPA binding protein 1 p...    31   4.3  

>BC007451-1|AAH07451.1|  374|Homo sapiens XPA binding protein 1,
           GTPase protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +3

Query: 27  SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 206
           +VV   +D + +      + N+ ++ S     KL    V+ +     ID S  V  + + 
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206

Query: 207 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 311
           + F   +N+ T+Y+SN+     +VL+   S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241


>AJ010842-1|CAA09376.1|  358|Homo sapiens ATP(GTP)-binding protein
           protein.
          Length = 358

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +3

Query: 27  SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 206
           +VV   +D + +      + N+ ++ S     KL    V+ +     ID S  V  + + 
Sbjct: 133 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 190

Query: 207 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 311
           + F   +N+ T+Y+SN+     +VL+   S++ V+
Sbjct: 191 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 225


>AC074091-4|AAX93201.1|  374|Homo sapiens unknown protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +3

Query: 27  SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 206
           +VV   +D + +      + N+ ++ S     KL    V+ +     ID S  V  + + 
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206

Query: 207 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 311
           + F   +N+ T+Y+SN+     +VL+   S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241


>AB044661-1|BAB17612.1|  374|Homo sapiens XPA binding protein 1
           protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +3

Query: 27  SVVSMCVDNAFAYTTDDLLKNISFSHSKCAPFKLQNYTVLKRLSNGFIDKSVDVGSISEL 206
           +VV   +D + +      + N+ ++ S     KL    V+ +     ID S  V  + + 
Sbjct: 149 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD--IIDHSFAVEWMQDF 206

Query: 207 QKFNFKINRLTSYISNIFEYEFVVLEHNLSTVHVI 311
           + F   +N+ T+Y+SN+     +VL+   S++ V+
Sbjct: 207 EAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVV 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,105,244
Number of Sequences: 237096
Number of extensions: 1312642
Number of successful extensions: 2412
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2412
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)