Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17f16
(269 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0083 - 604175-605776 28 0.89
08_01_0082 - 588269-588434,590800-591653 28 0.89
05_01_0281 + 2186500-2187435,2187518-2187616,2187707-2187772,218... 27 1.6
04_04_0532 + 26058100-26058229,26058355-26058559,26058678-260591... 27 1.6
01_07_0315 - 42692539-42693260,42693357-42693609 27 2.1
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665... 27 2.1
08_02_0393 + 16621137-16621139,16621392-16621583,16622559-166226... 27 2.7
01_07_0317 + 42699035-42699305,42699411-42700132 27 2.7
05_03_0425 - 13808840-13809414,13809552-13809765,13810268-138113... 26 3.6
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 26 3.6
01_07_0318 + 42703176-42703473,42703563-42704290 26 3.6
01_06_0377 - 28867796-28868290 26 3.6
07_03_0106 - 13460882-13462086,13463452-13463629 26 4.7
02_01_0705 - 5259949-5263887,5266207-5266509 26 4.7
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 25 6.3
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 25 6.3
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 25 6.3
05_01_0053 + 378123-379115 25 6.3
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 25 6.3
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 25 8.3
10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430 25 8.3
09_04_0586 - 18736643-18736914,18737085-18737187,18737279-187379... 25 8.3
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 25 8.3
04_01_0572 + 7404842-7405502,7405581-7406143,7406338-7406479,740... 25 8.3
>08_01_0083 - 604175-605776
Length = 533
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 96 TPAPFFSRYHTQTQKLGLQTPPG*TSHI-QKIQEPFIDK 209
TPAP F R+ +T + + P G HI ++++ P + +
Sbjct: 218 TPAPVFRRWFVETSPVPIPMPVGKLQHIVRRLERPEVQE 256
>08_01_0082 - 588269-588434,590800-591653
Length = 339
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 96 TPAPFFSRYHTQTQKLGLQTPPG*TSHI-QKIQEPFIDK 209
TPAP F R+ +T + + P G HI ++++ P + +
Sbjct: 221 TPAPVFRRWFVETSPVPIPMPVGKLQHIVRRLERPEVQE 259
>05_01_0281 +
2186500-2187435,2187518-2187616,2187707-2187772,
2187850-2188266
Length = 505
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 115 LKNGAGVSNHMWHRLKNDDGDDKPCL 38
L G G +NH H +DD DD P L
Sbjct: 56 LMRGGGAANHHHHDDDDDDDDDVPWL 81
>04_04_0532 +
26058100-26058229,26058355-26058559,26058678-26059157,
26059262-26059354,26059526-26059636,26059720-26059792,
26060072-26060208,26061040-26061097
Length = 428
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 116 PVSHADAEARVTDAARVDLAHTEDPGAVH*QAAE 217
P + A R T A+VD A EDPG + A E
Sbjct: 87 PQAPPPAPTRATKKAKVDAAKNEDPGGMSAPAKE 120
>01_07_0315 - 42692539-42693260,42693357-42693609
Length = 324
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -2
Query: 196 GSWIFCMCEVYPGGVC-NPSF 137
G FCMC+ YPG C +P F
Sbjct: 79 GCKTFCMCDFYPGVSCGDPRF 99
>01_06_0903 +
32862551-32864752,32865341-32865535,32866219-32866523,
32866664-32866849,32867137-32867314,32867548-32867574
Length = 1030
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 48 LSSPSSFFNRCHIWFDTPAPFFSRYHTQT 134
LSSPS +R FDT PF R HTQ+
Sbjct: 626 LSSPSPRHSRAS--FDTAMPFTPRRHTQS 652
>08_02_0393 +
16621137-16621139,16621392-16621583,16622559-16622612,
16623041-16623160,16623280-16623501,16623594-16623650,
16623993-16624046,16624395-16624426,16624888-16625023,
16625108-16625278,16625430-16625661,16626018-16626022
Length = 425
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 232 SVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSF 137
S CNF LS+ G +I+ + E++ VC+ SF
Sbjct: 82 SKICNFHTLSLLGYFIYNVLEIFIIIVCSISF 113
>01_07_0317 + 42699035-42699305,42699411-42700132
Length = 330
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 184 FCMCEVYPGGVC-NPSF 137
FCMC+ YPG C +P F
Sbjct: 89 FCMCDFYPGVSCGDPRF 105
>05_03_0425 -
13808840-13809414,13809552-13809765,13810268-13811317,
13811616-13811687,13812075-13812334,13812647-13812731
Length = 751
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 108 FFSRYHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNT 230
F SR QK GLQTP TS EP + NT
Sbjct: 36 FKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNT 76
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +3
Query: 48 LSSPSSFFNRCHI-WFDTPAPFFSRYHTQTQKLGLQTPPG*TSHIQKIQEP 197
L+SP + + W + PA +HT Q PP H QK Q P
Sbjct: 479 LNSPDNLYKTFGSPWSNEPAKGEPEFHTPACYSAEQPPPLQPIHFQKFQTP 529
>01_07_0318 + 42703176-42703473,42703563-42704290
Length = 341
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -2
Query: 184 FCMCEVYPGGVC-NPSF 137
FCMC+++PG C +P F
Sbjct: 98 FCMCDLFPGTSCGDPRF 114
>01_06_0377 - 28867796-28868290
Length = 164
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 119 VSHADAEARVTDAARVDLAHTED 187
V + DA V DAAR D AH +D
Sbjct: 18 VDNPDAARIVLDAARSDFAHNDD 40
>07_03_0106 - 13460882-13462086,13463452-13463629
Length = 460
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 178 MCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCL 38
+C+ + +C+P F YR +G+ + HRL+ DGD P L
Sbjct: 96 VCKAWLRAICDPVFLRR--YRAFHGSPPLLGLLHRLRVIDGDPAPRL 140
>02_01_0705 - 5259949-5263887,5266207-5266509
Length = 1413
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -2
Query: 268 TVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGVC 149
T+ C C + F NF G G++ C GGVC
Sbjct: 958 TIPCGIC-GMFGLTFANFSGNRDGGTFTLADCAAEEGGVC 996
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 95 HAGAVLQPVSHADAEAR 145
HAG L PV+ ADA+AR
Sbjct: 184 HAGECLDPVAVADAKAR 200
>05_05_0195 +
23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 98 AGAVLQPV--SHADAEARVTDAARVDLAHTEDPGAV 199
A A+L+P+ S AD EA TD++ E+ GAV
Sbjct: 579 ASAILRPLPSSAADGEAPPTDSSSPSPPSAEEAGAV 614
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 18 LHKLHNFKHGLSSPSSFFNRCHIWFDTPAPFF 113
+H LH+ +H LSSP H W P P F
Sbjct: 192 VHMLHDAEHALSSPCL---PAHPWRSFPFPGF 220
>05_01_0053 + 378123-379115
Length = 330
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 184 FCMCEVYPGGVC-NPSF 137
FC+C+ YPG C +P F
Sbjct: 79 FCLCDFYPGVSCGDPRF 95
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 74 PVPHMV*HAGAVLQPV-SHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQT 250
P+PH+ G + + + AD + + DLA + G + Q T+ ++ Q
Sbjct: 414 PIPHIPKINGDIPSAIEAFADHQRLLDRLVLYDLAEVKVKGDRNCQHVSFTQFRALSDQM 473
Query: 251 FHTSD 265
+HT++
Sbjct: 474 YHTTE 478
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 116 PVSHADAEARVTDAARVDLAHTEDPG 193
P + A R T A+VD A +DPG
Sbjct: 602 PPTPPPAHTRATKKAKVDAAKNKDPG 627
>10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430
Length = 156
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +3
Query: 99 PAPFFSRYHTQTQKLGL--QTPP 161
P PF SR+H T LGL +PP
Sbjct: 39 PLPFSSRHHLLTPPLGLHPSSPP 61
>09_04_0586 -
18736643-18736914,18737085-18737187,18737279-18737900,
18738376-18738463,18738537-18738614,18738741-18738816,
18738912-18738970,18739061-18739127,18739268-18739405
Length = 500
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 180 QKIQEPFIDKPPKLQNTLLLTARHSTHPTV 269
Q+ F + PP L+ LL T R +PT+
Sbjct: 376 QEFTPIFFNYPPGLRELLLYTKRRYNNPTI 405
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 262 GCVECLAVNSSVFCNFG 212
GC CLAVN + NFG
Sbjct: 325 GCFYCLAVNYLDYVNFG 341
>04_01_0572 +
7404842-7405502,7405581-7406143,7406338-7406479,
7406605-7407436,7407546-7407729
Length = 793
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 116 PVSHADAEARVTDAARVDLAHTEDPG 193
P + A R T A+VD A +DPG
Sbjct: 508 PPAPPPAHTRATKKAKVDAAKNKDPG 533
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,128,103
Number of Sequences: 37544
Number of extensions: 140085
Number of successful extensions: 332
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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