Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17f11
         (142 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    26   3.2  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    26   3.2  
M96145-1|AAA28057.1|  562|Caenorhabditis elegans elastase protein.     26   4.2  
AF016680-3|AAB66165.2|  562|Caenorhabditis elegans Abnormal gut ...    26   4.2  

>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 30  IANSDGVTIQHKMLTNVLSFLLEKY 104
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 30  IANSDGVTIQHKMLTNVLSFLLEKY 104
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 30  IANSDGVTIQHKMLTNVLSFLLEKY 104
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 30  IANSDGVTIQHKMLTNVLSFLLEKY 104
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>M96145-1|AAA28057.1|  562|Caenorhabditis elegans elastase protein.
          Length = 562

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 18  VNFCIANSDGVTIQHKMLTNVLSF 89
           VNF    SDGV+I+H +    L+F
Sbjct: 511 VNFLNIRSDGVSIEHGLFQEPLAF 534


>AF016680-3|AAB66165.2|  562|Caenorhabditis elegans Abnormal gut
           esterase protein 1 protein.
          Length = 562

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 18  VNFCIANSDGVTIQHKMLTNVLSF 89
           VNF    SDGV+I+H +    L+F
Sbjct: 511 VNFLNIRSDGVSIEHGLFQEPLAF 534


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,714,181
Number of Sequences: 27780
Number of extensions: 32045
Number of successful extensions: 78
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 12,740,198
effective HSP length: 27
effective length of database: 11,990,138
effective search space used: 227812622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)