Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17f02
         (282 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   2.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   3.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    21   8.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 234 VLGKGATGAVFQGV 275
           VLG GA G VF+GV
Sbjct: 839 VLGMGAFGRVFKGV 852


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 215 RVEHDQCPRERSDRCCIP 268
           R  H +CP+     CC P
Sbjct: 20  RCVHRRCPKNEVYSCCAP 37


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 240 RGHWSCSTRNSLNHA 196
           +  W CST+    HA
Sbjct: 849 QSEWDCSTKGRTTHA 863


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,930
Number of Sequences: 2352
Number of extensions: 3378
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)