Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17e24
         (291 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040567-1|AAH40567.1|  830|Homo sapiens WD repeat domain 75 pro...    28   4.7  
AL122097-1|CAB59265.1|  705|Homo sapiens hypothetical protein pr...    28   4.7  
AK023276-1|BAB14503.1|  551|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AK022607-1|BAB14126.1|  773|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AK022581-1|BAB14111.1|  782|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AC013439-1|AAX93081.1|  830|Homo sapiens unknown protein.              28   4.7  

>BC040567-1|AAH40567.1|  830|Homo sapiens WD repeat domain 75
           protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 382 DYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMKL 421


>AL122097-1|CAB59265.1|  705|Homo sapiens hypothetical protein
           protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 257 DYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMKL 296


>AK023276-1|BAB14503.1|  551|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13214 fis, clone NT2RP4001336. ).
          Length = 551

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 160 DYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMKL 199


>AK022607-1|BAB14126.1|  773|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12545 fis, clone NT2RM4000611, weakly similar to
           VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
          Length = 773

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 382 DYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMKL 421


>AK022581-1|BAB14111.1|  782|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12519 fis, clone NT2RM2001813. ).
          Length = 782

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 382 DYGLIQIELTKTAFGCFGNWLATVEQRQEKETELELQMKL 421


>AC013439-1|AAX93081.1|  830|Homo sapiens unknown protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 30  DYGLFVVKIRGLKFSCFTIVTMFIVARQAKQTNMNLIISL 149
           DYGL  +++    F CF      +  RQ K+T + L + L
Sbjct: 382 DYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMKL 421


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,036,776
Number of Sequences: 237096
Number of extensions: 631236
Number of successful extensions: 1156
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)